Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0713 ATGAGTTCGGCAAGCAGAGCTTGGAGTGTGGCAGCAAGTGTTGGAGTTGTGGAGGCCTTGAAGGACCAGGGGGTGTGCAGGTGGAATAATGTAATAAGGTCAGCTCAACAACAAGTGAAAAACCATGTTAGGTCGCTGTCTCAAGCAAACAAGCTTTCTTCTTATTCCTTTTCTGCTATGGTCTCCACCAGACTAATTAAAGATGAGAAGACAAAGCAGTCTGAGGAGTCCTTAAGGACGATCATGTACCTAAGCTGCTGGGGTTCAAGAACACTTCCTTATGAGGAATTAAAGAAGTTAATAAAGAAACAAGGAAAGAGAAAGAAAGAAAGAGAGAGAGAAAGAAAGAAAGTTACGATGTGTTCCCATGTTCATGTTCCTGTCCCTACTGTCTACTCTCTCGATTTTGAGGCCTTAGATGGTGTCCAGCCGAATGATGAGGAAAGGGGTCTCTTAGAAGGGATGGGGTCCCTCGGGATTCTGGGATTGCCACAGCTCAAGCTGTTAAAGGATATATATTTGATACAACTTACAAGTGTTAAATCCATCTTCAAGCAACAAAAACAGAAGTCTCAAACTTCTGGACGCGGCTCTGATACCCAGTTGCCGGAAGTTGCAGTTTCGGGTTTCCGGCTAAGAATAATGGCAGTGGAAAGTGAAAAATTGGGGTCCGATGGGAAGGTTTGGAATCTTTGTAGAATGCCATTTTGGCAAACGAACCATATTTCTCCATCTTCTTCCACATCTTCTATGCATTATACCCATCAGCAAAATCAGACTCTTCAGTCTATTGATAGATCGACGCATCAGTCTTCCAGCACGGTTTCGTCCATGGCTAAGTCTCTGCTCCCTACAAGGAGGAGGCTGCGTCTTGATCCTCCCAACAAGCTCTACTTTCCCTATGAACCGGGTAAGCAAGTTAGGAGTGCTATCACAATTAAAAACACCACCAAGTCTCATGTGGCTTTCAAGTTTCAAACAACTGCACCCAAGAGCTGTTATATGCGCCCCCCTGGTGGTATACTTGCACCTGATGAAAGCATAATTGCCATCGTGTTTAAGTTTGTCGAGCCACCCGAGAACAATGAGAAACCAATTGATCAAAAGAGCAAGGTTAAGTTCAAAATCATGAGCTTAAAAGTGGAAGGCCCAATGGACTACGTACCAGAACTGTTTGAAGAGCAGAGGGATCAAGTAGCAGTAGAGCGGATTCTGCGGGTTGTTTTTCTGGACTCCGAACGTCCTAGCCCTGCCATGGATAAACTTAAACGGCAGCTGGCTGAGGCTGAGGCTGCATTGGAAGCACGAAAGAAGCCCCCGGAGGAAAGAGGTCCTCGAATAGTTGGGGAAGGACTTGTTATAGATGAATGGAAAGAAAGAAGAGAAAAATACCTGGCACGGCAGCAGGTTGAAGGGGCTGATTCAGTGTAA 1431 0.4528 MSSASRAWSVAASVGVVEALKDQGVCRWNNVIRSAQQQVKNHVRSLSQANKLSSYSFSAMVSTRLIKDEKTKQSEESLRTIMYLSCWGSRTLPYEELKKLIKKQGKRKKERERERKKVTMCSHVHVPVPTVYSLDFEALDGVQPNDEERGLLEGMGSLGILGLPQLKLLKDIYLIQLTSVKSIFKQQKQKSQTSGRGSDTQLPEVAVSGFRLRIMAVESEKLGSDGKVWNLCRMPFWQTNHISPSSSTSSMHYTHQQNQTLQSIDRSTHQSSSTVSSMAKSLLPTRRRLRLDPPNKLYFPYEPGKQVRSAITIKNTTKSHVAFKFQTTAPKSCYMRPPGGILAPDESIIAIVFKFVEPPENNEKPIDQKSKVKFKIMSLKVEGPMDYVPELFEEQRDQVAVERILRVVFLDSERPSPAMDKLKRQLAEAEAALEARKKPPEERGPRIVGEGLVIDEWKERREKYLARQQVEGADSV 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0713 476 Pfam MSP (Major sperm protein) domain 289 399 IPR000535 -
Glsi04g0713 476 Gene3D Immunoglobulins 284 413 IPR013783 -
Glsi04g0713 476 PANTHER DUF3774 DOMAIN PROTEIN-RELATED 1 88 IPR022251 -
Glsi04g0713 476 ProSiteProfiles Major sperm protein (MSP) domain profile. 288 410 IPR000535 -
Glsi04g0713 476 Coils Coil 94 114 - -
Glsi04g0713 476 SUPERFAMILY PapD-like 277 418 IPR008962 -
Glsi04g0713 476 Coils Coil 32 52 - -
Glsi04g0713 476 Pfam Wound-induced protein 10 88 IPR022251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0713 Glsi-ChrGlsi04 5051870 5058142 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1371 14 14480685 14482932 Glsi04g0713 04 5051870 5058142 CCT
Glsi04g0713 04 5051870 5058142 Glsi04g0713 04 5051870 5058142 ECH