Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0673 ATGGCGGGGATTGGCAGAAGAGTAGGTTTTGAAGATTTGCTGCCAGTGATGGCTAATAAACTGGGAGGCGAAGGTCTGATAAAGGAGCTCTGCAATGGGTTTGAATTGCTGATGGACAAGGATAAAGGGGCGATCACTTTGGATAGCTTAAGGAGGAACTCAGGTCTTCTGGGTCTGAAAGAGTTGAAGGAGGATGAGCTGGTGGGCATGATGACAGAAGGAGATCTGGACGGTGATGGGGCTCTCAGTCAGATGGAGTTCTGCGTTTTGATGTTCAGATTAAGTCCAGACTTGATGAAACAGTCCTGGATTTGGCTTGAAGAGGCTCTCCAAGACGAACTTAATTCCATTTGA 354 0.4718 MAGIGRRVGFEDLLPVMANKLGGEGLIKELCNGFELLMDKDKGAITLDSLRRNSGLLGLKELKEDELVGMMTEGDLDGDGALSQMEFCVLMFRLSPDLMKQSWIWLEEALQDELNSI 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0673 117 ProSitePatterns EF-hand calcium-binding domain. 75 87 IPR018247 -
Glsi04g0673 117 Gene3D - 8 116 - -
Glsi04g0673 117 SUPERFAMILY EF-hand 7 98 IPR011992 -
Glsi04g0673 117 Pfam EF-hand domain pair 42 93 IPR002048 GO:0005509
Glsi04g0673 117 ProSiteProfiles EF-hand calcium-binding domain profile. 62 97 IPR002048 GO:0005509
Glsi04g0673 117 PANTHER CALCIUM-BINDING PROTEIN KIC 8 115 IPR044205 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0673 Glsi-ChrGlsi04 4671670 4672023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0673 10 114 EF-hand Containing Proteins AT5G54490 62.264 1.69e-42 134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0673 04 4671670 4672023 Glsi04g0673 04 4671670 4672023 ECH