Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0645 ATGTCAGTTATATCCACCTGGAAGTTAAACTGGTGCAAGATCCTTAGAAATCCTACCAAAACCCAAACTCTGATCAACTTCATTTTGGTCTCTTCTTCATTTGGTGCTGTTTATCTTGTTGTATCTCTTCTAGTTCTGCGCACTTCTAAGGTAGTACATGTAAATTCTTCGTCGCAAGATGTTTCCGCGGAGACATCTCTCGATCATCTTGTGTTTGGAATTGCTTCAAGCAAGAATTCATGGCCTAAGCGTAAGGAATATGCCAAGCTCTGGTGGAAACCCAATCAGATGAGAGGATGTGTATTTGTGGATGGCCTTACAGCTGAAGACCATTCCAAGAATGGCAGTTCTCTTCCTCCTCTCTGCGTCAATGAAGACACTTCGCGGTTTCGTTACACTTACCGGGGTGGATATCGATCAGCAATTCGTGTGGCACGTGTTGTTGCAGAGACCGTTGCTTTGAATCATTCCGATGTGAGATGGTATGTGTTTGGGGATGATGACACTGTCTTCTTTCCAGACAATCTGGTGAAGACTCTCTCCAAATATGATCATCAACTTTGGTACTATATTGGCACACACTCAGAGATTTATGAGCAGAATCGGTTCTTTGGCTTTGGAATGGCTTTTGGTGGAGCAGGATTCGCCATAAGTTCCTCTCTTGCAAAGGTTCTAGCAAAGGTCTTTGACTCATGCATAGAAAGGTATCCACATCTGTACGGAAGTGATGGGAGGGTGTACTCTTGCTTGGCGGAGCTTGGCGTTGGGTTAACCCATGAACCCGGATTTCATCAGGTTGATTTGAACGGAAATGTCTTTGGTCTATTGGCTGCGCACCCAGTAACACCGTTGTTGTCCCTCCATCATATGGATTACATAGATCCTATTTTCCCCAACATGACAAGGACACAAGCTCTAGGACATTTATTTGAAGCTGTTAAGGTTGATTCTCAGAGGATCCTACAACAAACAGTTTGCTATGACAGGTGGTTTTCATGGACAATATCAGTTTCATGGGGCTATGCTGTTCAGGTATTCCAGAACCATATGTTCTTACCAGATGTTCTGAACGTGCAAGAAACATTCAAGCAGTGGAAGAAGGGAACTGTTTTGGCTGGAGCATACACTTTCAACAAAAGACAACTTCATCCTGACCCATGTAAAAGACCCACCATTTTTTATCTAGATAGTGTGTCTTCTGGCAAGCATGGGATCATAAGCAATTACAATAAATCTTTTCAAAATTGCTCATACGACTCTGCTTCACCAAAGAAACTGGCAGTGATCAAAGTGATGACAAATAAGCTAGATCTTAGCATCAAACAGTTGCAGGCTCCAAGAAGGCAGTGCTGTGATCTGTTGCCCTCCAGCTCTCGTGACGTAATGGAAATTGCAATCAGAGAATGCAAAGACGAAGAATTGATTTACATGCACTGA 1437 0.4308 MSVISTWKLNWCKILRNPTKTQTLINFILVSSSFGAVYLVVSLLVLRTSKVVHVNSSSQDVSAETSLDHLVFGIASSKNSWPKRKEYAKLWWKPNQMRGCVFVDGLTAEDHSKNGSSLPPLCVNEDTSRFRYTYRGGYRSAIRVARVVAETVALNHSDVRWYVFGDDDTVFFPDNLVKTLSKYDHQLWYYIGTHSEIYEQNRFFGFGMAFGGAGFAISSSLAKVLAKVFDSCIERYPHLYGSDGRVYSCLAELGVGLTHEPGFHQVDLNGNVFGLLAAHPVTPLLSLHHMDYIDPIFPNMTRTQALGHLFEAVKVDSQRILQQTVCYDRWFSWTISVSWGYAVQVFQNHMFLPDVLNVQETFKQWKKGTVLAGAYTFNKRQLHPDPCKRPTIFYLDSVSSGKHGIISNYNKSFQNCSYDSASPKKLAVIKVMTNKLDLSIKQLQAPRRQCCDLLPSSSRDVMEIAIRECKDEELIYMH 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0645 478 Gene3D - 57 296 - -
Glsi04g0645 478 FunFam Fringe-related protein-like 57 314 - -
Glsi04g0645 478 PANTHER FRINGE-RELATED 36 475 - -
Glsi04g0645 478 Pfam Protein of unknown function, DUF604 200 451 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0645 Glsi-ChrGlsi04 4427462 4430915 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0645 24 443 Glycosyltransferase AT1G05280 55.349 4.11e-173 493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1430 14 14904497 14906080 Glsi04g0645 04 4427462 4430915 CCT