Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0644 ATGTACCATCGACGGAGAAAAGAAACCACCTTGCCTCTCTCCACCACCGTCCCCAACTTCGCAAGGAAGCTGCCATCATTGTCAATGCCCTCCAACTTCCTCAGAACTCCAAACCTCTTCCCTCTCCACTTTAAATCCTTCCTCTTGTTCCTTTCCCTTCTTCTCAACCTTTACCTCCTCCTCAACCAATGGCCCAAGTTCGCTCCTTCGTCCCCGATAATTTCGCGCATCACCGCCCCGCCCACCACGCGCCGCCACCTCGTCTTTGCCATCGCTTCGTCGTCTGTGTCTTGGCCCCGGAGGAAACCCTATGTCCGCCTCTGGTATTCCCCCAATTCGACTCGAGCATTTGCTTTCCTGGACGGCCCCGTTTCCAATGACTCTTCCTCACCTGATATTCCACCCGTGGTGATCTCCGCTGACACCTCGAAGTTCCCGTACACGTTCAAACGAGGACTCCGGTCGGCGATTCGCGTTGCGCGGGTGGTTAAGGAAGTGGTTGATCGAAATGAATCGAATGTTAGGTGGTTCGTCTTCGGTGATGATGATACAGTGTTCTTTGTGGACAATGTGGTGAAAACTCTGTCGAAATACGATCATAATAGGTGGTTCTACATAGGGAGCAATTCAGAGAGCCACGAGCAGAATGTGAAGAATTCCTTTAATATGGCATTTGGTGGCGGCGGTTTCGCCATTAGCCATTCGCTTGCTAGGGTTTTAGCTGGGGTTTTGGACTCGTGTTTACGGAGGTATGGGCATTTGTACGGAAGCGATTCAAGGATTTATTCTTGTGTGGCTGAGCTTGGTATTGAGTTAACGCATGAACCTGGGTTCCATCAGATAGATATGAGGGGGAATTTGTTTGGGATGTTGGCTGCACATCCATTATCTCCTTTGGTGTCCCTTCATCACTTGGATGCAGTGGAGCCTCTCTTTCCCGACATGAACAAAACACAAGCTTTGGAGCATCTTTTTGCAGCTGTAAATGTTGATCCTGCTAGGATCTTGCAGCAAACTGTCTGCTATGACCGGTCAAATCTATTGACTTTCTCAGTTTCATGGGGTCTTGCTGTCCAGGTTTTTCAAGGCAACGAACTTCTCCCAAATCTTCTTCCACTGCAGAGAACCTTTACGCCATGGAGGAGAGGTAGTAATGCTGATGCTCATTTTATGTTTAACTTGAGAGACTATCCTAGAGATACATGTAGACGGCCTTATGTCTTTTTCCTGGAAAGTGTTATAACTGATAAAAGGGGAATCTGGAGCAATTACCCCAGGCATGTTGTTGGGAATTGCATTGAATCAAACCCTATAAACCAGCTGAAACAAATCAGAGTTTTTTCAAGGAAGCTAGAGCTTGATACAGAACAGATGAAAGCCCCCCGCCGTCAGTGCTGCAATGTTATGCCATCTTCTAATGAATCAATGGTCATTCATATTAGAGAGTGTGGAATCCATGAACTAATCTCTATGCAATCCTAG 1482 0.4744 MYHRRRKETTLPLSTTVPNFARKLPSLSMPSNFLRTPNLFPLHFKSFLLFLSLLLNLYLLLNQWPKFAPSSPIISRITAPPTTRRHLVFAIASSSVSWPRRKPYVRLWYSPNSTRAFAFLDGPVSNDSSSPDIPPVVISADTSKFPYTFKRGLRSAIRVARVVKEVVDRNESNVRWFVFGDDDTVFFVDNVVKTLSKYDHNRWFYIGSNSESHEQNVKNSFNMAFGGGGFAISHSLARVLAGVLDSCLRRYGHLYGSDSRIYSCVAELGIELTHEPGFHQIDMRGNLFGMLAAHPLSPLVSLHHLDAVEPLFPDMNKTQALEHLFAAVNVDPARILQQTVCYDRSNLLTFSVSWGLAVQVFQGNELLPNLLPLQRTFTPWRRGSNADAHFMFNLRDYPRDTCRRPYVFFLESVITDKRGIWSNYPRHVVGNCIESNPINQLKQIRVFSRKLELDTEQMKAPRRQCCNVMPSSNESMVIHIRECGIHELISMQS 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0644 493 Gene3D - 75 340 - -
Glsi04g0644 493 PANTHER FRINGE-RELATED 44 489 - -
Glsi04g0644 493 Pfam Protein of unknown function, DUF604 215 466 IPR006740 -
Glsi04g0644 493 FunFam Fringe-related protein 76 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0644 Glsi-ChrGlsi04 4424970 4427396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0644 71 493 Glycosyltransferase AT4G15240 63.059 0.0 562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0644 04 4424970 4427396 Glsi14g1430 14 14904497 14906080 CCT
Glsi04g0644 04 4424970 4427396 Glsi04g0644 04 4424970 4427396 ECH