Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0624 ATGACTAAGCTTTGCCGGAAATTCACTCAATTCAGTTTTCAAGTTAGGATTCAACACCGCATTTCCGTTCTCCGGCGATGCATCCTTCGATTCTTGCACCGCTGTATGTTGTGTTCTGGAAGAAAGCCTTCTAAGTACCTCCTACTGCCATATTCCACTGCGCCTTCTCCTCCGTCGACATCCGCCGATGAGGCTAGTTGTGAATTGGTGCGGATGACACCGCCTGTGTTTCACACCCCTGACTTGGAGTCCGATTTGGTTGCTTTGAAGATCAGCCTCTTGGGTGACTGCCAAATTGGAAAGACAAGTTTTCTGGTGAAATATGTAGGGGATGAAATTGAACGGGGAGACAAACAGAGGAAAGGATTGACTCAGGTGGACAAAATTTTAGATGTAAAAGGAGCACGAATATCATATTGCATTTGGGAAGTAGAAGGTGATGGAAAATCACATGACCACATTCCAATGGCTTGCAAGGATTCTGTGGCAATCTTGTTTATGTTTGATCTAACAAGTCGATGTACATTAAGCAGTGTCATGGGGTGGTACAAAGAAGCCAGGAAATGGAATCAGACGGCAATTCCAGTTATGATCGGAACCAAGTTTGATGATTTCATTCAACTCCCCATAGATTTGCAATGGACCATTGCTAGTGAGGCAAGAGCATTTGCAAAGGCCCTGAAGGCAACGCTGTTCTTTTCAAGTGCTACCTACAATATCAACGTGAACAAGATCTTCAAATTCATCACTGCGAAGCTCTTCGATCTGCCATGGACAGTGGAACGGAATCTCACTGTTGGAGAGCCCATCATAGATTTCTAA 822 0.4453 MTKLCRKFTQFSFQVRIQHRISVLRRCILRFLHRCMLCSGRKPSKYLLLPYSTAPSPPSTSADEASCELVRMTPPVFHTPDLESDLVALKISLLGDCQIGKTSFLVKYVGDEIERGDKQRKGLTQVDKILDVKGARISYCIWEVEGDGKSHDHIPMACKDSVAILFMFDLTSRCTLSSVMGWYKEARKWNQTAIPVMIGTKFDDFIQLPIDLQWTIASEARAFAKALKATLFFSSATYNINVNKIFKFITAKLFDLPWTVERNLTVGEPIIDF 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0624 273 PANTHER - 86 261 - -
Glsi04g0624 273 SMART rab_sub_5 89 256 - -
Glsi04g0624 273 Gene3D - 83 263 IPR027417 -
Glsi04g0624 273 FunFam Septum-promoting GTP-binding protein 1 79 263 - -
Glsi04g0624 273 PRINTS Transforming protein P21 ras signature 130 152 - -
Glsi04g0624 273 PRINTS Transforming protein P21 ras signature 191 204 - -
Glsi04g0624 273 PRINTS Transforming protein P21 ras signature 89 110 - -
Glsi04g0624 273 PRINTS Transforming protein P21 ras signature 231 253 - -
Glsi04g0624 273 ProSiteProfiles small GTPase Rab1 family profile. 83 273 - -
Glsi04g0624 273 Pfam Ras family 90 253 IPR001806 GO:0003924|GO:0005525
Glsi04g0624 273 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 264 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0624 Glsi-ChrGlsi04 4318631 4320716 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0624 04 4318631 4320716 Glsi04g0624 04 4318631 4320716 ECH