Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0615 ATGACTTGTAAAAGCAGAGGAGAACTGTCTCCTAGAAGCGTTATATCGCAAAAATGGGCGCTTTTCCTCTGTCTGGGAAGCTTCTGTGCTGGGATGTTCTTCACAAATAGGATGTGGGCTATCCCTGAACCTAAAGGACTTGCACGAACAACAGCTATGGAAGCTGAAAAATTGAATGTAGTTTCGGAGGGTTGTAATTCAAGAATTTTGCAAGAGAAGCAAGTGAAGCGAGAATCTAAATACATGTTTGGGAAAGTTTTCAAGACTCATAGTGCCATACAAACTTTGGACAAGACTATTTCAAATTTAGAGATGGAATTAGTAGCTGCGAGGACAGCTCAGGAGTCTATACGTAGTGGGTCTCCTTTATCAGAAGGTCCAGAGATGGTTCAACCATCTGGTAAGAGAAAGTACGTAATGGTTGTAGGAATTAATACTGCTTTTAGCAGCCGCAAAAGAAGAGACTCAGTTCGTGCAACCTGGATGCCACAAGGTGAGAAAAGAAAGAAGCTGGAGGAAGAGAAGGGTATTATCATTCGTTTTGTAATTGGTCACAGTGCTACATCAGGGGGTATCCTAGACAGAGCTGTTGAAGCAGAGGACAAAAAGCATGGAGACTTGCTGAGGCTGGACCATGTTGAAGGATACCTTGAATTGTCAGCAAAGACCAAGACATACTTTGCTACTGCTGTTAAATTGTGGGATGCTGATTTCTATGTCAAAGTTGATGATGATGTTCATGTAAATATCGCAACACTAGGAGAAACTCTAGTTAGACACCGATCGAAACCACGAATATACATTGGATGCATGAAATCTGGACCTGTTCTTTCTCAAAAAGGGGTAAGGTACCACGAACCTGAATATTGGAAATTTGGTGAGGCTGGAAACAAGTACTTCCGGCATGCCACGGGACAATTGTATGCCATTTCAAAAGATTTGGCTACATATATTTCAAATAACCAGCACGTTCTTCACAAGTATGCCAACGAGGATGTTTCAATTGGAGCTTGGTTCATTGGACTTGATGTGGAGCACATAGATGATAGGAGACTCTGCTGTGGCACTCCACCAGATTGTGAATGGAAGGCCCAGGCAGGCAACGTTTGTGTTGCTTCATTTGATTGGACCTGCAGTGGAATTTGCAGGTCTGCTGAAAGGATTAAAGAGGTGCATAGGCGGTGTGGAGAAGGCGAAAATGCTTTATGGAGTGCCTCTTTCTAG 1224 0.4297 MTCKSRGELSPRSVISQKWALFLCLGSFCAGMFFTNRMWAIPEPKGLARTTAMEAEKLNVVSEGCNSRILQEKQVKRESKYMFGKVFKTHSAIQTLDKTISNLEMELVAARTAQESIRSGSPLSEGPEMVQPSGKRKYVMVVGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAVEAEDKKHGDLLRLDHVEGYLELSAKTKTYFATAVKLWDADFYVKVDDDVHVNIATLGETLVRHRSKPRIYIGCMKSGPVLSQKGVRYHEPEYWKFGEAGNKYFRHATGQLYAISKDLATYISNNQHVLHKYANEDVSIGAWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWTCSGICRSAERIKEVHRRCGEGENALWSASF 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0615 407 Coils Coil 93 113 - -
Glsi04g0615 407 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 97 349 IPR002659 GO:0006486|GO:0016020|GO:0016758
Glsi04g0615 407 Gene3D - 135 352 - -
Glsi04g0615 407 Pfam Domain of unknown function (DUF4094) 16 112 IPR025298 -
Glsi04g0615 407 FunFam Hexosyltransferase 132 353 - -
Glsi04g0615 407 Pfam Galactosyltransferase 152 349 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0615 Glsi-ChrGlsi04 4242976 4246693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0615 1 407 Glycosyltransferase AT1G05170 78.870 0.0 703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1459 14 15142898 15146579 Glsi04g0615 04 4242976 4246693 CCT
Glsi04g0615 04 4242976 4246693 Glsi04g0615 04 4242976 4246693 ECH