Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0609 ATGGCTGTGAAATCTGTTCTTGTACCTGGGTTAACAAGTCCTCAAGTTGGTTGGCATGATTTATGCATCAGACAATCTGCTTTTGAATTGAATTGTGAAAATAGGCGGAAGAGAGCACAGAAATGGGTATCGGTTAGCCGAGTGGTGAGGCTTAGAGAGGATGAGAAACCATCGAAGCCAGCCCAGGTAATGGTGCGGATGGTTGATCAGACGAGTCGTGATCTCTCCAAGGGATTGCAGAGAGATTTGAGCTCCCTTCCAAAGCCATTATCCGTATCTGATATTTTAGCTGCTCCTGATGACAGTGCAAAAGTACGAATATCATTCAAGGGAGTCCTGGGTTCATACAGTGAGGATGCAGCACTGAAAGCCTACCCTAACTGTGAAACAGTTCCATGTGGTGATTTTGAAGCTGCTTTTAAGGCTGTTGAATTGTGGTTGGCTGACAAAGTTATCATTCCCATTGAAAATACTTCAGGGGGGAGCATCCACCGCAACTATGATTTACTTCTTCGCCATAGGCTTCACATTGTTGGTGAGGTGCAGTTGGCTATTAACCTCTCGCTTCTAGCTCTGCCTGGTGTCAGAGTAGAGTACTTAAAACGTGTTCTAAGTCATCCCCAGGCGCTCAATTTAAGTGATGTCTTCCTCACTAAATTAAATGTTGCCAGAGAAAGTGTTGATGACTCAGCTAGTGCTGCTCAGTATGTAGCTTCAAATGGTCTATACAACGCTGGGGTGATTGCAAGCCCTCGAGCTGCAGAAATCTATGGGCTTAATGTACTTGCAGAAAGAATCCAAGATGATTCTGAAATTATCAGTCGATATCTAATTCTTGCAAGGGATCCGATAATTTCAAGAGCTGATAAGCCCTTTAAGACAAGCATAGTGTTTACTTTGGACGAAGGTCCTGGGGTATTGTTTAAGGCCTTGGCAGTGTTTGCATTAAGGAACATAAATTTAACAAAGATTGAAAGTCGACCACAAAGAAATCGACCATTAAGAGTGGTTGATGACTCCAACACAGGAACTGCCAAGTATTTTGATTACCTTTTCTATATTGATTTTGAGGCTTCTATGGCCGAACCTCGAGCACAAACTGCTTTAGGACATCTGCAGGAATTCGCCACATTTATTCGGGTGCTAGGCTGCTATCCCATGGATGCAACCACATAG 1176 0.4354 MAVKSVLVPGLTSPQVGWHDLCIRQSAFELNCENRRKRAQKWVSVSRVVRLREDEKPSKPAQVMVRMVDQTSRDLSKGLQRDLSSLPKPLSVSDILAAPDDSAKVRISFKGVLGSYSEDAALKAYPNCETVPCGDFEAAFKAVELWLADKVIIPIENTSGGSIHRNYDLLLRHRLHIVGEVQLAINLSLLALPGVRVEYLKRVLSHPQALNLSDVFLTKLNVARESVDDSASAAQYVASNGLYNAGVIASPRAAEIYGLNVLAERIQDDSEIISRYLILARDPIISRADKPFKTSIVFTLDEGPGVLFKALAVFALRNINLTKIESRPQRNRPLRVVDDSNTGTAKYFDYLFYIDFEASMAEPRAQTALGHLQEFATFIRVLGCYPMDATT 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0609 391 Gene3D - 288 389 - -
Glsi04g0609 391 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 41 390 - -
Glsi04g0609 391 Gene3D - 103 191 - -
Glsi04g0609 391 SUPERFAMILY Periplasmic binding protein-like II 106 286 - -
Glsi04g0609 391 CDD ACT_CM-PDT 293 386 - -
Glsi04g0609 391 Pfam Prephenate dehydratase 107 283 IPR001086 GO:0004664|GO:0009094
Glsi04g0609 391 FunFam Arogenate dehydratase 288 389 - -
Glsi04g0609 391 SUPERFAMILY ACT-like 277 387 IPR045865 -
Glsi04g0609 391 Gene3D - 192 269 - -
Glsi04g0609 391 ProSiteProfiles Prephenate dehydratase domain profile. 106 281 IPR001086 GO:0004664|GO:0009094
Glsi04g0609 391 ProSitePatterns Prephenate dehydratase signature 2. 321 328 IPR018528 GO:0004664|GO:0009094
Glsi04g0609 391 ProSiteProfiles ACT domain profile. 295 386 IPR002912 -
Glsi04g0609 391 FunFam Arogenate dehydratase 187 269 - -
Glsi04g0609 391 CDD PBP2_Ct-PDT_like 104 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0609 Glsi-ChrGlsi04 4203340 4208272 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0609 04 4203340 4208272 Glsi04g0609 04 4203340 4208272 ECH