Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0606 ATGGATAGGTACGTGGTCCAAATCACCATTATTTCTTTTGAAGAATCCTCTATTTCTCTCTCATCTACCGACCTTATCTCATCTGTGGAGAAAGCTCCAAAGCAAAAGGGACAAAAGCAGGAGAAGGGTCAGAAAAAAGAAGAAGAAGCAAAGCGTAGGAAGTATCCTCTTTCCAGAAAGAAAAAGAAAAGAGGAGGGAGGAAGAAAGAAAAACAGAGGATTGGGGAAATGGGTGACTCTAGGAGATTGGGTTCTCTCTTACTGATAATATTGCTGGTGACATGCGCGAGTGGGGAGGACCCTTACAGGTTCTACACATGGAATGTCACTTATGGAGACATTTATCCTCTTGGAGTTAAACAGCAGGGGATTTTGATTAACGGGCAGTTCCCAGGTCCACAGATCGAATCAGTGACCAACGACAACTTGATTATCAGTGTATTCAACAGCTTGGATGAACCTTTCCTCATCTCTTGGAATGGGGTGCAGCAGAGGAGGAACTCTTGGCAAGATGGAGTTTATGGTACAAATTGTCCAATCCCACCTGGGCAGAACTTCACTTACGTTCTTCAAGTAAAGGATCAGATTGGTAGCTACTTCTACTTTCCTTCCCTGGCATTGCATAAGGCTGCAGGTGGCTATGGTGGCTTCAAAATTGCCAGCCGCTCGGTAATTCCCGTGCCTTTTCCTCCTCCAGCAGGAGATTTCACCATATTGGCGGGAGACTGGTACAAGAGAAATCACACAGATTTGAAGGCCATTTTGGATGGTGGAAGTGACCTTCCTTTCCCTGATGGGCTTATCATCAATGGCCGTGGTTCTAATGCTTACTCATTCACAGTTGATCAAGGCAAGACTTACAGATTCCGGATATCAAATGTGGGGCTCACAACTTCAATCAACTTCAGAATCCAAGGGCACAAGATGCTGCTCGTTGAGGTGGAAGGAACCCACTCTCTCCAAAACACTTACGACTCTCTTGACATTCATCTTGGCCAGACTTACTCTGTATTAGTCACTGCTGATCAACCACCGCGAGACTACTACATTGTGGTCTCTTCAAGATTCACCTCCCAAGTGCTATCTGCAACCTCCATTCTTCATTACAGTAACTCCGCAGCAGCTGTTTCTGGCCCTCCCCCTGGTGGCCCAACCATTCAAATTGATTGGTCTATTGAACAAGCAAGATCTCTCAGACGGAATCTGACAGCAAGTGGACCAAGACCTAATCCCCAAGGATCTTACCATTATGGAATGATAAACACAACTCGTACTATCAGGCTTCAAAATTCAGCTCCGGTTATCAATGGGAAACAGAGATATGCTGTCAATAGTGTGTCCTTCATCCCTGCTGATACACCACTTAAGCTTGCTGACTACTTCAAGATCCCTGGGGTTTTCTCCCTTGCAAGTATCCCAGATAGCCCCACTGGCTCTGGTGGTTACCTTCAAACTTCTGTCATGGCCGCCGATTTCCGGGGATTTGCAGAGGTTGTGTTTGAGAATCCTGAGGACACTATGGAATCTTGGCACATCGATGGCCACAACTTCTTTGTTGTAGGGATGGATGGAGGACAATGGTCAGATGCAAGCAGATTGAATTACAATTTAAGAGACACAATTTCTCGTTGCACTGTTCAGGTGTATCCCAAGTCATGGACTGCAGTGTACGTGCCTTTGGACAATGTGGGAATGTGGAATGTGAGGTCGGAGAACTGGGCTCATCAGTATCTAGGGCAGCAATTTTATCTGCGAGTGTATTCACCTGCAAATTCATGGAGAGATGAGTACCCAATCCCAAGTAATGCTCTGCGATGTGGTCGTGCAGTAGGCCATAGCACTCCAGCTCTATAA 1854 0.4595 MDRYVVQITIISFEESSISLSSTDLISSVEKAPKQKGQKQEKGQKKEEEAKRRKYPLSRKKKKRGGRKKEKQRIGEMGDSRRLGSLLLIILLVTCASGEDPYRFYTWNVTYGDIYPLGVKQQGILINGQFPGPQIESVTNDNLIISVFNSLDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGQNFTYVLQVKDQIGSYFYFPSLALHKAAGGYGGFKIASRSVIPVPFPPPAGDFTILAGDWYKRNHTDLKAILDGGSDLPFPDGLIINGRGSNAYSFTVDQGKTYRFRISNVGLTTSINFRIQGHKMLLVEVEGTHSLQNTYDSLDIHLGQTYSVLVTADQPPRDYYIVVSSRFTSQVLSATSILHYSNSAAAVSGPPPGGPTIQIDWSIEQARSLRRNLTASGPRPNPQGSYHYGMINTTRTIRLQNSAPVINGKQRYAVNSVSFIPADTPLKLADYFKIPGVFSLASIPDSPTGSGGYLQTSVMAADFRGFAEVVFENPEDTMESWHIDGHNFFVVGMDGGQWSDASRLNYNLRDTISRCTVQVYPKSWTAVYVPLDNVGMWNVRSENWAHQYLGQQFYLRVYSPANSWRDEYPIPSNALRCGRAVGHSTPAL 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0606 617 MobiDBLite consensus disorder prediction 29 75 - -
Glsi04g0606 617 SUPERFAMILY Cupredoxins 419 613 IPR008972 -
Glsi04g0606 617 PANTHER MULTI-COPPER OXIDASE 120 582 IPR045087 -
Glsi04g0606 617 FunFam Monocopper oxidase-like protein 419 616 - -
Glsi04g0606 617 Gene3D - 418 612 IPR008972 -
Glsi04g0606 617 Gene3D - 234 408 IPR008972 -
Glsi04g0606 617 CDD CuRO_3_AAO_like_1 450 572 IPR034275 GO:0005507
Glsi04g0606 617 Pfam Multicopper oxidase 109 222 IPR011707 GO:0005507
Glsi04g0606 617 Pfam Multicopper oxidase 235 371 IPR001117 -
Glsi04g0606 617 CDD CuRO_1_AAO_like_1 104 220 IPR034273 GO:0005507
Glsi04g0606 617 MobiDBLite consensus disorder prediction 55 69 - -
Glsi04g0606 617 SUPERFAMILY Cupredoxins 99 249 IPR008972 -
Glsi04g0606 617 CDD CuRO_2_AAO_like_1 234 369 IPR034271 -
Glsi04g0606 617 Pfam Multicopper oxidase 458 587 IPR011706 GO:0005507|GO:0016491
Glsi04g0606 617 Gene3D - 102 223 IPR008972 -
Glsi04g0606 617 FunFam Monocopper oxidase-like protein 233 407 - -
Glsi04g0606 617 SUPERFAMILY Cupredoxins 229 409 IPR008972 -
Glsi04g0606 617 MobiDBLite consensus disorder prediction 34 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0606 Glsi-ChrGlsi04 4186617 4191564 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0606 04 4186617 4191564 Glsi04g0606 04 4186617 4191564 ECH