Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0595 ATGCTATACTGCAATCACTCCTCTGCTATAAATAAAGCATCAAACACCTTGCCTTGCTGCAAAAGACATTCTACCATCCTACTGTACTTATACACCCTCAGAGGCTTCTTTTGGCTAGCTAGCTTAATGGCCACCCAAGTGTCTCTTCCTCTCTATGAAAAATTCTGGGTTAACCCCACTTCTAAAAAGGTTATGGATATTCTAATTCTGCTTCTCCTCCTACTGCTTCTTGGTTACCGCGTTATCTCCTTCAACAACCACTCTTTACCTTGGTTCCTCGCATTCCTATGCGAATCATGGTTCACCATCACTTGGGTTCTCGCCATCTGCGCCAGGTGGACCCCTTCAGTCATTAAAACCTACCCATATCGTCTCTTGCAACGGGTAAGCGAGCTCCCTGCGGTGGACCTGTTTGTGACAACGGCAGATCCTGTGCTGGAACCACCCATTCTCACAGCGAACACAGTGCTGTCTCTGTTGGCACTTGATTACCCAGCTCATAAGTTAGCTTGCTATGTTTCTGATGATGGGTGCTCACCTATTACCTTCTATGCCCTTGTGGAAGCTTGTAAATTCGCTAAGCTTTGGGTACCTTTCTGTAAGAACCATAATGTGCAAATTAGAGCTCCTTTTAGATATTTCGCTGAGCATATTGACGACACTCGCTCACCAGAATTCAGAAAAGAATGGTTACGAATGAAGGATGAATATGAGGTTATATGGGAGAACAAGGAAGAAGTTTCCGACGGGTTGCCGCATTTGATCTACATATCAAGAGAGAAGCGCCTAAAGCATCCACATTATTACAAAGCGGGTGCCATGAATGTGTTGACGAGAGTCTCTGGGTTGATGACCAATGCTCCATTTACGCTGAACGTAGATTGCGACATGTTTGTCAACAATCCACAGATTGTTGTGCACGCAATGTGCATTTTGCTGGATTCCAAGGGCCAAAACGAAGTTTCATTTGTTCAATGTCCTCAGGAATTTTATGCTGCTCTTAAAGACGATCCTTTCGGAAACCAGCTTCAAGTTTTTTTTGTGTACATGGGGGGTGGAATAGCAGGACTCCAAGGACCTCTCTATGGGGGAACCAACTGCTTCCACAGAAGAAAAGTGCTTTATGGTCTTTCTCCAGATGACATACAAATTAATGGAAAAATATCAGACGAGGTGTCAGTTCAAATATTTGGACGCTCAAAGGAGTTGGTGAAATCAGCTTCTCATGCTTTGGAAGGGAAGACATATTCCCCTAACTCTAGTATTTCAAACTCCCTTCAGGCAGCCAACCAAGTTGCTTCTTGTGGATATGAATATGGCACTGCCTGGGGTAAACAGGTGGGGTGGATATATGGATCAACAACAGAGGATGTGCTTACTGGGCTGACAATCCATACAAAGGGTTGGAGATCAGAAATGTGTACCCCGGACCCAATTGCATTTACGGGCTGCGCACCGGAAGGTGGACCAGCTTCATTGACCCAACAAAAGAGATGGGCCATAGGCTTTCTTGAAATCTTCTTCAGCAAGCACTGTCCTATTTTAGGCACTCTTTTTGGTAAGCTACAGTTGAGTCAGTGCATTGCGTATTTGTGGAACATTACCTGGGGCTTTCGCAGTGTCCCTGAAATATGCTATGCCACTCTTCCTGCGTATTGCATCATTACCAACTCTAATTTCCTCCCCAAGGGACAAGGGCTATGGCTTCCAGTTGCCCTTTTTGTGGTTTACAACATACACACCATATCAGAGTACTATTTAACTGGGCTGTCAATGAGAGCATGGTGGAATAACCAGAGAATGTCCAGAATAATAGCCATGAATGCGTGGCCTTTTGCTGTTTTGAGTATCATACTTAAGGTCCTGGGAATATCTGACCCAGTGTTTGAGATAACACGGAAAGACCAGCTCACTTCTAGTGGTGGTGTTAATGGCGATGACGAAGATCCTGGTAGATTCACCTTCAATCTGTCTCCAATGTTTATACCAGGAACCACTATTTTGCTTCTCCAGCTCACAGCTCTGGCTATGTACTTGCTGGGGTTGCAACCTCCAACTCAGAGTGGGAGAGGTGGGTGTGGGCTAGGCGAGCTGTTCTCTACCTCCTATCTGATAACATGCTACTGGCCATTTTTGAAAGGGCTGTTTGAGAAAGGAAAATATGGGATTCCCTTATCCACAGTTTGCAAGTCAGCCGCTCTGGCTTTCCTCTTTGTGTGCTTTTCTAAAAGTAGAACTACCACTACGGACTGA 2253 0.4505 MLYCNHSSAINKASNTLPCCKRHSTILLYLYTLRGFFWLASLMATQVSLPLYEKFWVNPTSKKVMDILILLLLLLLLGYRVISFNNHSLPWFLAFLCESWFTITWVLAICARWTPSVIKTYPYRLLQRVSELPAVDLFVTTADPVLEPPILTANTVLSLLALDYPAHKLACYVSDDGCSPITFYALVEACKFAKLWVPFCKNHNVQIRAPFRYFAEHIDDTRSPEFRKEWLRMKDEYEVIWENKEEVSDGLPHLIYISREKRLKHPHYYKAGAMNVLTRVSGLMTNAPFTLNVDCDMFVNNPQIVVHAMCILLDSKGQNEVSFVQCPQEFYAALKDDPFGNQLQVFFVYMGGGIAGLQGPLYGGTNCFHRRKVLYGLSPDDIQINGKISDEVSVQIFGRSKELVKSASHALEGKTYSPNSSISNSLQAANQVASCGYEYGTAWGKQVGWIYGSTTEDVLTGLTIHTKGWRSEMCTPDPIAFTGCAPEGGPASLTQQKRWAIGFLEIFFSKHCPILGTLFGKLQLSQCIAYLWNITWGFRSVPEICYATLPAYCIITNSNFLPKGQGLWLPVALFVVYNIHTISEYYLTGLSMRAWWNNQRMSRIIAMNAWPFAVLSIILKVLGISDPVFEITRKDQLTSSGGVNGDDEDPGRFTFNLSPMFIPGTTILLLQLTALAMYLLGLQPPTQSGRGGCGLGELFSTSYLITCYWPFLKGLFEKGKYGIPLSTVCKSAALAFLFVCFSKSRTTTTD 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0595 750 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 215 383 IPR029044 -
Glsi04g0595 750 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 243 726 - -
Glsi04g0595 750 SUPERFAMILY Nucleotide-diphospho-sugar transferases 149 510 IPR029044 -
Glsi04g0595 750 Pfam Cellulose synthase 248 383 IPR005150 GO:0016020|GO:0016760|GO:0030244
Glsi04g0595 750 Pfam Cellulose synthase 135 238 IPR005150 GO:0016020|GO:0016760|GO:0030244
Glsi04g0595 750 Pfam Cellulose synthase 395 732 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0595 Glsi-ChrGlsi04 4059053 4063861 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0595 50 742 Glycosyltransferase AT2G32530 46.144 0.0 660
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0595 04 4059053 4063861 Glsi04g0595 04 4059053 4063861 ECH