Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0568 ATGGGAAAGAATCAGAAGACGGGGCTAGGTAGGGCTTTGGTGAAGCAGCATAACCAGATGATCCAACAGAGTAAGGAAAAGGGTCACTTCTACAGAAATCAGCAGAAGAAGGTACTGGAATCGGTCACAGAGGTCACCGACATTGATGCCATCATCGAACAAGCAGACGAGGCTGAGCGTCTCTTCGTTGCTGACCGCCCCACCCCTAACCTCCTCATCAGTCTGGATCCAAGCTCAAGCTTCAGCACTAATGACATGACACCTGAAGAGAAGAGAGACCTACAGAAGAGAGAGGAGGCTCTGCATGCTGGCAGTCTCCGAGTTCCACGCAGGCCACCATGGAGTGCAAACATGTCTGTGGAGGAGCTTGATGCCAATGAAAGACAAGCTTTCTTAATTTGGCGTCGCAGCCTAGCAAGACTTGAGGAAAATGAGAAGCTTGTCCTTACACCCTTTGAGAAGAATCTTGATATCTGGAGACAGCTCTGGCGGGTTGTTGAGCGCAGTGACTTGCTTGTTATGGTTGTTGATTCACGAGATCCGCTGTTCTATCGCTGTCCAGATCTTGAGGCATATATGCGAGAGGTTGATGAGTATAAACGTACCTTGCTGCTGGTTAATAAGGCAGATCTTTTGCCAGCTTCTATCAGAGAGAAATGGGCAGAGTACTTCCGCTCTCATGATATTCTCTTCATCTTCTGGTCAGCTAAAGCTGCCTCTGCAACTCTGGAAGGTAAAAAGCTTCATTCATCATCGGAGGCTGATAACCTGGGGAAGACCAATAACCCAGACACAAAAATATATGGCAGAGATGAGCTTCTGGCCCGATTACAGTCAGAGGCAGAAGATATTGTAGAGATGAGAAGATCAAGCTCCTCTGGCACAGGGCCGTCTGGCATTCAATCTCAAAATGCTGCTGGTAGTTCATCATCAAGTAATGTAGTTGTGGGATTTGTTGGTTATCCTAATGTAGGGAAAAGTTCAACTATTAATGCTTTGGTAGGCCAAAAACGGACTGGTGTCACCTCCACTCCAGGGAAGACAAAGCACTTCCAAACATTAATTATTTCTGATAGACTGACACTTTGTGACTGTCCTGGATTAGTTTTTCCATCTTTCTCAAGCTCAAGGTATGAGATGATTGCCTGTGGGGTGTTGCCTATTGATAGAATTACTGAACACAGGGAGGCTGTCCAAGTTGTGGCTGATAGAGTCCCGAGACTCGTCATTCAGGAGGTTTATAAGATCAGCCTTCCAAAACCTAAGCCATATGAGTCCCAAACACGCCCCCCTCTTGCATCTGAACTTTTAAGAGCTTATTGTGCTTCTCGTGGTTATGTTGCCTCTAGCGGGCTACCTGATGAAACTAGAGCTGCTCGTCAGATACTAAAGGATTACATTGATGGGAAGCTGCCTCACTATGAAATGCCTCCTGGAATGTCGAAAGAGGAACTAGCTCTGGAAGACCCCACAGGACTTGACTCAGTTAACTCGCATGAGTCAGATTCTTCTGATATCGAAAATTCTTCAGACGTTGATAGTGAAGTTGCACCTAATCTTGAGCACGTACTGGATGATCTCAATTCATTTGACATGGCTAATGGTCTTGCTTCAAAGAAAGTTCCTATTAAAAAGTCTAATGCATCTCATAAGCATCATAAAAAGTCTCAGAGGAAAAAAGATCGTTCGTGGAGAGTAGGGAATGATGATGCTGATGGGATGCCTGTTGCAAGATTCTTCCAGAAACCAGCGAATACAGGTCCAGTGAAAGGCTGA 1776 0.4566 MGKNQKTGLGRALVKQHNQMIQQSKEKGHFYRNQQKKVLESVTEVTDIDAIIEQADEAERLFVADRPTPNLLISLDPSSSFSTNDMTPEEKRDLQKREEALHAGSLRVPRRPPWSANMSVEELDANERQAFLIWRRSLARLEENEKLVLTPFEKNLDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYMREVDEYKRTLLLVNKADLLPASIREKWAEYFRSHDILFIFWSAKAASATLEGKKLHSSSEADNLGKTNNPDTKIYGRDELLARLQSEAEDIVEMRRSSSSGTGPSGIQSQNAAGSSSSSNVVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISDRLTLCDCPGLVFPSFSSSRYEMIACGVLPIDRITEHREAVQVVADRVPRLVIQEVYKISLPKPKPYESQTRPPLASELLRAYCASRGYVASSGLPDETRAARQILKDYIDGKLPHYEMPPGMSKEELALEDPTGLDSVNSHESDSSDIENSSDVDSEVAPNLEHVLDDLNSFDMANGLASKKVPIKKSNASHKHHKKSQRKKDRSWRVGNDDADGMPVARFFQKPANTGPVKG 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0568 591 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 159 371 IPR030378 GO:0005525
Glsi04g0568 591 MobiDBLite consensus disorder prediction 544 561 - -
Glsi04g0568 591 CDD HSR1_MMR1 158 371 - -
Glsi04g0568 591 MobiDBLite consensus disorder prediction 285 311 - -
Glsi04g0568 591 MobiDBLite consensus disorder prediction 288 311 - -
Glsi04g0568 591 Gene3D - 158 372 IPR027417 -
Glsi04g0568 591 FunFam Large subunit GTPase 1 376 477 - -
Glsi04g0568 591 PRINTS GTP1/OBG GTP-binding protein family signature 316 336 IPR006073 GO:0005525
Glsi04g0568 591 PRINTS GTP1/OBG GTP-binding protein family signature 362 377 IPR006073 GO:0005525
Glsi04g0568 591 Pfam 50S ribosome-binding GTPase 316 372 IPR006073 GO:0005525
Glsi04g0568 591 MobiDBLite consensus disorder prediction 538 591 - -
Glsi04g0568 591 Gene3D - 375 477 IPR023179 -
Glsi04g0568 591 PANTHER LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED 1 565 IPR043358 GO:0003924
Glsi04g0568 591 MobiDBLite consensus disorder prediction 74 94 - -
Glsi04g0568 591 FunFam Large subunit GTPase 1 158 372 - -
Glsi04g0568 591 MobiDBLite consensus disorder prediction 490 514 - -
Glsi04g0568 591 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 446 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0568 Glsi-ChrGlsi04 3898112 3910629 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0568 04 3898112 3910629 Glsi04g0568 04 3898112 3910629 ECH