Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0548 ATGATGACCTTCTTTTTCCTTTTGCCTATATATAATGCATACTTTCTGTTGGAAACATTCTGTAAATTGGCGAGTCTATCACAAGCAACCCAATTCTTCATTTTGCCTCTGGTTGTACTTGTAACAATCATGTCTGTCAAGGAATGTGGCCATCACGAGGAGCGGCGCCGCCAGCTCTTCCGCCTCATATTCGTCGGCATTATCGCCTTCATCATCCTTATACTCTTCATCATCTTCTTAATCTGGGTCATCCTTAGACCCACCAAACCCCGCTTCTTCCTCCAAGACGCCACCGTTTACGCTTTTAACCTCTCCTCCACCTTCCCCGAAGTTTCTCCCACACCCAACACCCTCACCATCACCATGCAGGTCACCCTCTCTTCTCGCAACCCCAACGATCGAATCGGAGTGTACTATCAGAGGCTCGACGTCTATGCATCCTACCGGAACCAACAGATCTCGCTGGGGACGGCGTTGCCTGCCACTTACCAAGGTCACAAGGATGTGACGGTGTGGTCTCCGTTCTTGTACGGAAACTCCGTGCCGGTGTCGCCGTATGTGTGGAGTTCTCTGCAGCAGGATCAGAATGTAGGGGGGGTGTTGGTGAACGTGAAGGCGATTGGAAGGGTGAAATGGAAGGTAGGGACTTGGGTGTCGGGAAGGTACCACATCTACGTGAACTGCCCGGCGTATATCAGGTTCGCCGGAGATGGGGAGAAGGGGATCGGAGTTGTGGGTCCGGCGGTGAAGTTTCAGATTCTACAGAGTTGCAGTGTTGATGTTTAA 786 0.5115 MMTFFFLLPIYNAYFLLETFCKLASLSQATQFFILPLVVLVTIMSVKECGHHEERRRQLFRLIFVGIIAFIILILFIIFLIWVILRPTKPRFFLQDATVYAFNLSSTFPEVSPTPNTLTITMQVTLSSRNPNDRIGVYYQRLDVYASYRNQQISLGTALPATYQGHKDVTVWSPFLYGNSVPVSPYVWSSLQQDQNVGGVLVNVKAIGRVKWKVGTWVSGRYHIYVNCPAYIRFAGDGEKGIGVVGPAVKFQILQSCSVDV 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0548 261 PANTHER OS05G0367900 PROTEIN 61 259 IPR044839 GO:0098542
Glsi04g0548 261 Pfam Late embryogenesis abundant protein 125 228 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0548 Glsi-ChrGlsi04 3717332 3718117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0548 55 228 EF-hand Containing Proteins AT5G21130 26.437 1.74e-07 49.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1521 14 15588111 15588779 Glsi04g0548 04 3717332 3718117 CCT