Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0541 ATGTTCGCTGAAGATCCGAATCCGAAGCCCGTCCTGATCCGGGAAGTATGGGCGTCTAATCTTGAATCCGAGTTCGAACTCATCCGCGAAGTGATTGATCGCTACCCTTTTATCTCTATGGATACCGAGTTCCCCGGGGTGATCTACCGGCCCCACCTCGACCCCGCCATGCCCTACCATCACCGTCGACTCCTACCCTCCGACCATTACCGTCTCTTGAAGGCCAACGTCGACGCCTTGAACCTCATCCAGGTGGGTCTCACCCTCTCCGACGCCGACGGCAACCTTCCCGACCTCGGATCCGGCAACCGTTTCATCTGGGAGTTCAATTTTAGGGATTTCGACGTGGCGCGCGACGCCTATGCCCCCGATTCGATCGAGTTGCTTCGGCGGCAGGGAATTGACTTCCGGCGAAACGCCGAGGACGGAATCCACTCGTCCCGGTTCGCCGAGTTGATGATGTCGTCGGGACTCGTGTGCAACGACTCAGTGAGTTGGGTGACGTTTCATAGCGCGTATGATTTCGGGTACCTGGTCAAGATCCTCACGCGACGGAACTTGCCGAACGGGGTAGAGGAATTCTTGAGTGTGTTGAGGGTGCTTTTCGGCCACAACGTTTATGACGTGAAGCATATGATGCGGTTCTGTCAGAGCCTGTACGGGGGATTGGACCGGGTAGCCAAGACCCTCAACGTGAACCGGGCGGTTGGGAAGTGCCACCAAGCGGGGTCAGACAGCTTGCTGACCTGGCACGCCTTTCAGAAAATGAGGGACGTGTATTTTGTAAAGGATGGGCCGGAGAAACACGCCGGCGTGTTGTATGGATTAGAAGTGATCTGTTAA 843 0.5623 MFAEDPNPKPVLIREVWASNLESEFELIREVIDRYPFISMDTEFPGVIYRPHLDPAMPYHHRRLLPSDHYRLLKANVDALNLIQVGLTLSDADGNLPDLGSGNRFIWEFNFRDFDVARDAYAPDSIELLRRQGIDFRRNAEDGIHSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTRRNLPNGVEEFLSVLRVLFGHNVYDVKHMMRFCQSLYGGLDRVAKTLNVNRAVGKCHQAGSDSLLTWHAFQKMRDVYFVKDGPEKHAGVLYGLEVIC 280
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0541 280 Pfam CAF1 family ribonuclease 16 145 IPR006941 -
Glsi04g0541 280 FunFam Putative CCR4-associated factor 1 7 3 280 - -
Glsi04g0541 280 SUPERFAMILY Ribonuclease H-like 13 276 IPR012337 -
Glsi04g0541 280 Gene3D - 3 279 IPR036397 GO:0003676
Glsi04g0541 280 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 13 277 IPR039637 GO:0004535|GO:0030014
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi04g0541 Glsi-ChrGlsi04 3690520 3691362 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1524 14 15619022 15619873 Glsi04g0541 04 3690520 3691362 CCT