Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0527 ATGGCGCCAAGAAAATCCGGCGAGCGTGAAATGCTCGTGGAGTCGATGTACTCGGTCCTTGCGCTTCTCTTCGTCCTCGTTACTTGCGTTGAGCTTTGCGACGCCGCCACCGTAGTTGACGTCTACCGGCTGATTCAGTACGATATGTCAGGGGCTCCATTCGGATCTCGACTCGCTAGTCTCAATCACCATGCCGGCTCCCTCCACTTCTCTCCCCATGCTGATCTCTCGCGCACTGTGCTCGTGATACCGCTTCGCGAATTGAACATGACTTTTGTCAAAGAATATATTGCTGAAAGAAAGCCACTGGGGGGTTTATTAATTTTGCTGCCCCAGATGTTCAGTTTAGAAAATAAAGGTGGCATGGGAAGTAATCATCAAGACGATGGTAAGGAGATGCTGAAGAATTTGTTGGCTGAACTTGAACAGATACTCATACACACCAACTTACCTTACCCTGTTTATTTTGCTTTTGAGGATGACAACATTGATGCTGTGTTAACTGATATAAAAAAGAATGATGCCACTGGTCAACCTGCTACTGCAACTACTGGCGGATACAAGTTTGTTGTTTCAGCTCCAGAACCAAAGAAAGTTGCATCTCCCACCATTACAAATATACAGGGATGGTTGGCAGGACTGAAGACTGATGATGATGCTAGTCAATTACCTACCATTGCTATAGTGGCATCATATGACACCTTTGGGGCTGCTCCTGCATTATCAGTGGGAAGTGATAGTAGTGGAAGTGGTGTTGTGGCTCTTCTTGAAGTGGCTAGACTGTTCTCTCTTCTCTACTCTAATCCAAAGACAAGAGGACATTACAATCTACTCTTTGGGCTAACATCTGGCGGACCTTACAACTACAATGGAACACGTAAGTGGCTTCGCAACTTTGATCAACGATTGCGTGAAAGCATTGACTATGCTATCTGCTTAAATAGTATTGGCTCATGGGAAAATGATTTGTGGATTCATGTGTCTAAGCCTCCAGAAAATGCCTACATAAAGCAAATTTTCGAAGATTTTTCTAGCGTAGCAGAAGAGTTGGGCTTTAAAGTTAATCTGAAGCACAAGAAAATAAATATTTCAAATCCTCGAGTAGCTTGGGAGCATGAACAGTTTTCAAGGCTGAGAGTTACTGCCGCCACCCTCTCTGAACTCTCCACTGCACCTGAATTGCTAGAAAGGACTGGGGGTTTGGTTGACAGCAGGCATTTTGTCAATGAAACAGCAGTTGTCAGAAGTGTGAAGTTAATTGCTGAGAGTCTTGCGAGGCATATTTACAGACATCAAGGACAGAACATCCAGATCTTTGCGGACAACAGCAGTTTGGCTGTAAATCCTTCTTATATTCGATCATGGTTAGATGCTTTGTCACGAACACCTCGGGTGGCACCATTTCTGCCAAAAGATGATCCTTTTGTCATGGCACTGAAAAAGGAATTAGAAGACCACACTGATGTCGTTGATCTGCAACGAGATGTGCTGGATGGGATGTTCACTTTCTATGATTCAACTCGAGCAATGCTAAATGTATATCAGGTTGCCAGTGTGACATTTGACCTTCTGTTGCTTCTAGTATTGGGATCATATTTAATTGTGCTCTTCAGTTTTCTGGTCATCACAACTAGGGGCCTTGATGATCTAATCAGTTTATTTCGGCGGCCTCCCTCTCGAAAAGTGAAGACTGCTTAG 1698 0.4411 MAPRKSGEREMLVESMYSVLALLFVLVTCVELCDAATVVDVYRLIQYDMSGAPFGSRLASLNHHAGSLHFSPHADLSRTVLVIPLRELNMTFVKEYIAERKPLGGLLILLPQMFSLENKGGMGSNHQDDGKEMLKNLLAELEQILIHTNLPYPVYFAFEDDNIDAVLTDIKKNDATGQPATATTGGYKFVVSAPEPKKVASPTITNIQGWLAGLKTDDDASQLPTIAIVASYDTFGAAPALSVGSDSSGSGVVALLEVARLFSLLYSNPKTRGHYNLLFGLTSGGPYNYNGTRKWLRNFDQRLRESIDYAICLNSIGSWENDLWIHVSKPPENAYIKQIFEDFSSVAEELGFKVNLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSTAPELLERTGGLVDSRHFVNETAVVRSVKLIAESLARHIYRHQGQNIQIFADNSSLAVNPSYIRSWLDALSRTPRVAPFLPKDDPFVMALKKELEDHTDVVDLQRDVLDGMFTFYDSTRAMLNVYQVASVTFDLLLLLVLGSYLIVLFSFLVITTRGLDDLISLFRRPPSRKVKTA 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0527 565 PIRSF Nicalin 3 560 IPR016574 GO:0009966|GO:0016020
Glsi04g0527 565 PANTHER NICALIN 10 565 IPR016574 GO:0009966|GO:0016020
Glsi04g0527 565 SUPERFAMILY Zn-dependent exopeptidases 190 409 - -
Glsi04g0527 565 Pfam Nicastrin 226 363 - -
Glsi04g0527 565 Gene3D Zn peptidases 136 427 - -
Glsi04g0527 565 CDD M28_nicalin_like 138 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0527 Glsi-ChrGlsi04 3590836 3597506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0527 5 563 EF-hand Containing Proteins AT3G44330 74.061 0.0 859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0527 04 3590836 3597506 Glsi04g0527 04 3590836 3597506 ECH