Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0525 ATGACTCGCATTGTGGTTCAGCGGGGTTCCTCTGGCAGTTCTTCTTCAAACCCAAGCCGTTCTTCTTCCTTGCATGGGCCTTCATCAGCTCGGGCTGAGCCACAGGTCACGGTTCCTCCGATTCCTTCAGCTGTGAAAGATGAGGACAGTGGAGGGGAGCTACTGGAGCCAGTTGTTGGTAATGAGGTTTTAGAGTGTTCTGGGAATAGTGACAGTAAGGCAAAAAACGGTGACCTTTTGGTGGAAAGTCTCCATTATGAGCAGAATGACGCCTCAAGTGATAAAATAGCTGATGTTGAGAAAGCTGTTACGGTGGAGGTTGGGAGTACAGGAGAATTAATGAAAGGATTGTGTGGACTGAGAATTTCGGAAAGGCTTGCATCAGAAAATGAGGGCTCAAGTGGGGATTCTTCTGTTACTGCTAACGGTACCTCACATCCACCACCTCCTCCTCCTCCTCTTCCACCTACAAAACCTTCAGCAGCGAACTTGAATTCGAGGAGAAATGTGTCGTCAAATTTAAGTTCCGTCCATATAGGATCATCTAGAAGAGCATCTGCACGACCTGTCGTTTCAGCTAGGACATCCCCTGTTGGGTCTCGACCTTCTTCTCCTAGGTCTCATAATGAAAACGAGGGCTACAATAGTGCTGACGAACAGAATCCATGCTTTGCATCCTCTTATGATGATTTAGAAAAAGAACGGCAATTTGAAGTTGATATCAGAAGGGCAAAAGGTTTCGAAGTAAAAAGAATGATGGAGGATGGAAATTGCCTTTTCCGTGCGGTTGCTGACCAGGTGTATGGGGACTCTGAATTGTATGATTTGGTCCGACAGATGTCCATAGATTATATGGAAGGGGAAAGAGATCACTTTGCTCAATTTATAACTGAAGGCTTCACATCTTATTGCAAAAGGAAGAGAAGAGATAAGGTCTATGGAAACAATGTTGAGATCCAAGCTTTGTGTGAGATGTATAATCGCCCCATTCATATATACTCCTATACTACAGAACCGATAAATATATTTCATGGAAGCTATAACACTGACACACCACCAATACGACTGAGTTATCATCATGGGAATCATTACAATTCCCTTGTTGACCCACGACGCTTGACAATTGGTGCAGGGCTTGGGTTCGGCTGCCTCCATGGGACAAATGTTGACAAAGATCAAATCAAGGCTGCTATAAAAGCTCAACAAGACCAACAGATTGATAATGCACTTTTAGCACAGGGACGGTTTTACTCTGATATTGAGCTTACAGAAAAGGAGATTGAACGTATGGTAATGGAAGTTTCTCGGGCTGAATATCTTGCGGATGGTACATTTAGGCAGCAGCTTGCCCGCAGAGAATCCTCGACCTCAAATGCCGAGCCATCATCTTCTGGAGGAAGAACATCTGTTGCTGATCGCAAGATGGAGTTTGGTAAAGAGCAAGATTGTAACCTTAGTAGAAGTATGCAGATGGTGCTATCGATGGGATTCAGCTACCTGCAAGTGATAGAGGCTTATAGCATATTTGGCGATGATGTGGATTCTATGGTTTGTTACCTCTTGGAAACTGGGAGTAGCAGCAGAAGGAAAGGCAAGGCCACTGAATGA 1608 0.4459 MTRIVVQRGSSGSSSSNPSRSSSLHGPSSARAEPQVTVPPIPSAVKDEDSGGELLEPVVGNEVLECSGNSDSKAKNGDLLVESLHYEQNDASSDKIADVEKAVTVEVGSTGELMKGLCGLRISERLASENEGSSGDSSVTANGTSHPPPPPPPLPPTKPSAANLNSRRNVSSNLSSVHIGSSRRASARPVVSARTSPVGSRPSSPRSHNENEGYNSADEQNPCFASSYDDLEKERQFEVDIRRAKGFEVKRMMEDGNCLFRAVADQVYGDSELYDLVRQMSIDYMEGERDHFAQFITEGFTSYCKRKRRDKVYGNNVEIQALCEMYNRPIHIYSYTTEPINIFHGSYNTDTPPIRLSYHHGNHYNSLVDPRRLTIGAGLGFGCLHGTNVDKDQIKAAIKAQQDQQIDNALLAQGRFYSDIELTEKEIERMVMEVSRAEYLADGTFRQQLARRESSTSNAEPSSSGGRTSVADRKMEFGKEQDCNLSRSMQMVLSMGFSYLQVIEAYSIFGDDVDSMVCYLLETGSSSRRKGKATE 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0525 535 MobiDBLite consensus disorder prediction 450 473 - -
Glsi04g0525 535 MobiDBLite consensus disorder prediction 144 159 - -
Glsi04g0525 535 Gene3D - 228 380 - -
Glsi04g0525 535 MobiDBLite consensus disorder prediction 1 59 - -
Glsi04g0525 535 FunFam OTU domain-containing protein 5 228 380 - -
Glsi04g0525 535 SUPERFAMILY Cysteine proteinases 239 370 IPR038765 -
Glsi04g0525 535 Pfam OTU-like cysteine protease 255 364 IPR003323 -
Glsi04g0525 535 MobiDBLite consensus disorder prediction 126 224 - -
Glsi04g0525 535 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 480 523 IPR015940 -
Glsi04g0525 535 CDD OTU_plant_OTU6-like 243 369 - -
Glsi04g0525 535 ProSiteProfiles OTU domain profile. 247 370 IPR003323 -
Glsi04g0525 535 PANTHER OTU DOMAIN CONTAINING PROTEIN 150 376 - -
Glsi04g0525 535 MobiDBLite consensus disorder prediction 160 182 - -
Glsi04g0525 535 MobiDBLite consensus disorder prediction 196 223 - -
Glsi04g0525 535 MobiDBLite consensus disorder prediction 1 30 - -
Glsi04g0525 535 MobiDBLite consensus disorder prediction 450 469 - -
Glsi04g0525 535 MobiDBLite consensus disorder prediction 127 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0525 Glsi-ChrGlsi04 3579618 3584442 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0525 04 3579618 3584442 Glsi04g0525 04 3579618 3584442 ECH