Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0506 ATGGCGGTGAGGGCAACAGTCTCGCGCTTCCCTACAGACCCAGACGCCCAGGAGGGCTCGGGTCTGCCATGGGGAGTGACGGTGACGCCCTTCGCGGCCAAGGACGAGAACGGTCAAGCTCCAGTGTACGGATCTGACGGACACCTCTTACCCCGGTGCGAGAACTGCTGGGCCTACTTCAATACTTACTGCGAACTCGAACAGTGGTCATGGAGTTGCTCCCTCTGTGGGACTCTCAATGGGCTTTCCTCCAAGGCCATTACTCGATACTCTCACCCTCATTCTTGTGCCGAGATGATGTCATCCTTCATAGATCTTGAATTACCTGAAGAATCATCAGAGGAAGCAGCAATACAAGCCCGTCCAGTCTATGTTGCTGCTGTTGACTTGTCCTCTTCAGAGGAGTTTTTAGAACTCACTAAAAGTGCATTGCTGGCAGCTTTGGAAGCTCTTGCTCCTGGTTCACTTTTTGGGCTTGCTACCTTCAGCCACAAATTAGGGTTGTATGATGTTCAAGGTCCTATACCCATTGTGAAAAATGTTTTCATCCCTACTGATACAGAGGGAACCTTACCAATTGAGCTTGAAGATGTTATGCCTTTGTTGCAGTTTTTGGCTCCTGTGGAAACTTGTAAGGAACGTATTGCATCTGCACTTGAAACACTTAGACCAACAACTTCATGGGAGAGAACCACGGCAGCAGGTCAAGGACTGGATGGTATTCTGATTGGTGGACGTGGTTTTGGGGTGGCAATGGAGGCCCTTCTCAATTACCTTGGATCTGAATATGGAAACACCTTTGCTTTAGCTAGAGTTTTTGCCTTCTTATCTGGTCCTCCTGATTATGGAGCTGGACAGTTGGATACAAGACGATATGGTGAGCAATATGCCAGCAAAGGAGAGGATGCAGATCGTGCTTTACTCCCTGAGCAGACACCATTCTATAAAGATCTGGCTGCTGTTGCTGTTCAAGCAGGTGTCTGTGTGGACATATTTGCTGTAACAAATGAGTACACAGATTTGGCATCCCTAAAGTTCCTGAGTATTGAGAGTGGGGGATCTTTATTTTTATATACAAGTACTGAGGATTCAACTTTGCCTCAGGACATGTATCGGATGCTGAGTCGGCCATATGCTTTCAGCTGTGTACTGCGATTGAGAACATCAACTGAATTTAAACCTGGCCATTCTTATGGTCATTTTTTCCCAGATCCACAGTATGAAAATGTTCAGCACATCATCTGTTGTGACTCTTATGCCACATATGCTTATGACTTTGAGTTTGACAACAATGTTGGATTTTCAAGACACGCATCAGAAGTTCCTACACTTCAGATTGCATTTCAGTACACAGTAGTAGTTCCTCCTGAGGAACTTTCAAGTCCAGGAGTGGTTTCTACAAGTAGAACCAAATACTCCCTTAAACGTCGATTGAGGATCCGAACCTTGCAGTTTAGTACTGCTCAGAACATTAATGAACTTTATGACAGTGTTGATCCGGAAGTTGTGCTATCTTTGCTTGTTCACAAGGTCATATTAGCTTCTTTGAAGGAAGGAGTTCGGGAGGGCAGGATGTTACTTCAAGATTGGCTAGTGCTGCTTACAGCCCAGTACAATGATGCTTATAAACTTGTTCAGTACAGGAGTGGAAGTTCCATAAGTTCTCAGATTGATGTTTCATTCTCTCAATGTCCTCAACTACAGCCCCTAACCCGCCTAATTTTTGCTCTTCTTCGTAATCCCCTTCTTCGCTTTCATGAAGAAGGTGTTCACCCTGACTATCGTATCTATCTGCAATGCCTTTTCAGTGCTCTGGAACCAAGTTCCCTTCACCGTGCTGTGTATCCAGTGTTAACATCATACTCTACTATAGATAAACAAGCATATCCACGCCATTCCTTGAGTCGTGCTGCACTGATTACCAGTGGCAGTCCAATATTTTTCCTCGATGCGTTCACAACTCTGATTGTGTTTTACTCTTCAACTGCAGACCCAACACTTCCTTTCCCTCCACCCCATGATTGTTTGTTAAGGAGTACAATCAACAAATTGAAGCAAGAAAGATGCATCACTCCCAAACTCATGTTTATCCGAGGAGGACAGGATGATGCCTCAATTTTTGAGAACTATCTGATTGAGGAACAGGATGTTGATGGAAGTGGTCTTACAAGTGTTATGGGTTTTGTTTCCTTCCTCGAAGGTATTACGCAGGATGTGTTGGAGTACATGAAATAG 2235 0.4488 MAVRATVSRFPTDPDAQEGSGLPWGVTVTPFAAKDENGQAPVYGSDGHLLPRCENCWAYFNTYCELEQWSWSCSLCGTLNGLSSKAITRYSHPHSCAEMMSSFIDLELPEESSEEAAIQARPVYVAAVDLSSSEEFLELTKSALLAALEALAPGSLFGLATFSHKLGLYDVQGPIPIVKNVFIPTDTEGTLPIELEDVMPLLQFLAPVETCKERIASALETLRPTTSWERTTAAGQGLDGILIGGRGFGVAMEALLNYLGSEYGNTFALARVFAFLSGPPDYGAGQLDTRRYGEQYASKGEDADRALLPEQTPFYKDLAAVAVQAGVCVDIFAVTNEYTDLASLKFLSIESGGSLFLYTSTEDSTLPQDMYRMLSRPYAFSCVLRLRTSTEFKPGHSYGHFFPDPQYENVQHIICCDSYATYAYDFEFDNNVGFSRHASEVPTLQIAFQYTVVVPPEELSSPGVVSTSRTKYSLKRRLRIRTLQFSTAQNINELYDSVDPEVVLSLLVHKVILASLKEGVREGRMLLQDWLVLLTAQYNDAYKLVQYRSGSSISSQIDVSFSQCPQLQPLTRLIFALLRNPLLRFHEEGVHPDYRIYLQCLFSALEPSSLHRAVYPVLTSYSTIDKQAYPRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPHDCLLRSTINKLKQERCITPKLMFIRGGQDDASIFENYLIEEQDVDGSGLTSVMGFVSFLEGITQDVLEYMK 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0506 744 Pfam Sec23/Sec24 helical domain 499 611 IPR006900 GO:0006886|GO:0006888|GO:0030127
Glsi04g0506 744 MobiDBLite consensus disorder prediction 1 22 - -
Glsi04g0506 744 Gene3D Sec23/Sec24 helical domain 469 629 - -
Glsi04g0506 744 SUPERFAMILY Helical domain of Sec23/24 499 615 IPR036175 GO:0006886|GO:0006888|GO:0030127
Glsi04g0506 744 SUPERFAMILY Zn-finger domain of Sec23/24 41 111 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Glsi04g0506 744 PANTHER SEC24-RELATED PROTEIN 3 728 - -
Glsi04g0506 744 SUPERFAMILY vWA-like 122 376 IPR036465 -
Glsi04g0506 744 Gene3D - 28 102 - -
Glsi04g0506 744 Pfam Sec23/Sec24 trunk domain 121 373 IPR006896 GO:0006886|GO:0006888|GO:0030127
Glsi04g0506 744 Gene3D von Willebrand factor, type A domain 121 378 IPR036465 -
Glsi04g0506 744 SUPERFAMILY beta-sandwich domain of Sec23/24 3 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0506 Glsi-ChrGlsi04 3448281 3455397 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0506 04 3448281 3455397 Glsi04g0506 04 3448281 3455397 ECH