Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0501 ATGGAACAATCCCGTCCTAACATTTGGAAAATTGAGGCATTTTATTTAGATTTTGATTGGAATTGGTATGACAGTTCAGTTCAAAGGTTGAGGGTTGTCTGTTGTGATTCCGCTCACTTCGTATTCTCCGCTCCCACATCATCCACCACCACCTCCCTCCCTTCTCCTCTTCACATTTCTTCGTCTCAGGTAACCATGTCAACCTTGGCAACTGCAAAATTTTCCCCCCATTGCGAGTTTCGGACTGCAAGCCGAAACCAATTCACCAGTGCCATAGTTAAGTGCCCATCCTCAGTCGGATTTGTGAAGAATGTTTCTAGATCATTTGGCTTGAAATCTTCCCCCTCATTTAGAGCAACTTGCATGGCTACATACAAGATTAAGTTGATTGATCCCGAGGGAAAAGAGAACGAGTTTGAGGCCCCTGATGATAGCTACATCCTAGATTCAGCAGAGAATGCTGGAATTGAGCTCCCTTATTCATGCCGGGCTGGAGCATGCTCTACCTGTGCTGGGAAGATAGCTTCTGGTGAAGTGGATCAGTCTGATGGCTCATTCCTTGATGACAATCAAGTGAAGGATGGATATGTGCTAACCTGTGTCTCCTATCCAACTTCAGATTGTGTAATTCATACTCACAAGGAAGGCGATCTCTACTGA 660 0.45 MEQSRPNIWKIEAFYLDFDWNWYDSSVQRLRVVCCDSAHFVFSAPTSSTTTSLPSPLHISSSQVTMSTLATAKFSPHCEFRTASRNQFTSAIVKCPSSVGFVKNVSRSFGLKSSPSFRATCMATYKIKLIDPEGKENEFEAPDDSYILDSAENAGIELPYSCRAGACSTCAGKIASGEVDQSDGSFLDDNQVKDGYVLTCVSYPTSDCVIHTHKEGDLY 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0501 219 CDD fer2 130 211 IPR001041 GO:0051536
Glsi04g0501 219 PANTHER FERREDOXIN 75 219 - -
Glsi04g0501 219 ProSitePatterns 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 162 170 IPR006058 GO:0051537
Glsi04g0501 219 Gene3D - 122 219 IPR012675 -
Glsi04g0501 219 SUPERFAMILY 2Fe-2S ferredoxin-like 120 215 IPR036010 GO:0051536
Glsi04g0501 219 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 125 216 IPR001041 GO:0051536
Glsi04g0501 219 NCBIfam ferredoxin [2Fe-2S] 123 219 IPR010241 GO:0009055|GO:0022900|GO:0051537
Glsi04g0501 219 FunFam Ferredoxin 123 219 - -
Glsi04g0501 219 Pfam 2Fe-2S iron-sulfur cluster binding domain 131 205 IPR001041 GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0501 Glsi-ChrGlsi04 3408063 3417833 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0501 04 3408063 3417833 Glsi04g0501 04 3408063 3417833 ECH