Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0485 ATGTTTAATGTTCTCGAAGACGAAGATGGATCTGATGCACTCAAGTTCAAGATCTCTCATTTCTGGCCACATTTAGCAATACCCACCAATTGCTCCGTCAAGCACGCCTTACCAATGAAACGTTCGATTCGCCCGCTGTTCGGAGTTCTACTTGTCATTGTCTTCGTCGCCACTCTCATCTGCAGAACCATTGTCCGCAGGGGCTTATCGTCTATTGAGCTGGAGAGCAGAGTATTGGTTCGAGTTCCGGCACCTGTATTGAACGGGACGCTACTAAAATACGCCGCCATCGACATTGGAGAAGAAAAATCGAAGCAAGAGATTCAGCAGCTCTTGGATGGCAACTTTGGCAGTCAAGCCAGGCACCGCACGTTTGTTTCTTGGCGTAGATTCATCCACCATGATATAACCGAGAAGGACTCAAGGAGCATACCGGCAACGTTGCGTTCTCCATTGTTTTATAGATATTGGTTAGATTTTCGAAAGGTCTTGAACAATTGGGCTCGGAAGAAGAGGTTTCAACCTGGAATTATGTCCGATTTAACAGGTCAGGTCAAGCTTCCAATTGATAGGCACAACGGATTGGTGGGTTCCGAAGAGCGATATTCGTCCTGTGCGGTGGTTGGCAATAGTGGGATTTTGCTGAAGACTGACTATGGGGAGCTTATTGATAGCCATGAGGTAGTTATTCGAATGAACAATGCAAGGGTTGAGAAGTTTGAGAAGAAAGTGGGGTCTAAAACTAGCATTTCATTTGTAAATAGCAACATTTTGCATCTCTGTGCGAGAAGGGCAGGGTGCTATTGCCACCCATATGGACCTAATGTGCCAATGGTTATGTACATTTGCCAACCAGCTCATTTCTTGGATTACACAGTTTGTAATTCTTCTCACAAAGCCCCTTTGTTGATCACCGATCCACGGTTTGATGTGTTGTGTGCTCGGATTGTGAAGTACTACTCTTTGAAGCGGTTTGTGGAGGAGACAGGGAAGCCTTTGGAACAATGGAGCTCTGCCCATGATGGTGCTCTATTCCATTACTCTTCTGGTATGCAAGCTGTTATGCTGGCTTTGGGAATCTGTGATAGAGTAAGCATATTTGGGTTTGGCAAGTCAGCTTCAGCTAGACATCATTATCACACCAACCAGAAGGCTGAGCTTCATTTGCATGACTATGAGGCAGAATATGCGTTTTACCATGACCTGGTCGATGGACACAGACCGGTACCTTTTCTCTCGGACAGATTCAAGATTCCTCCCGTTGTCTTGTATCAATGA 1278 0.4562 MFNVLEDEDGSDALKFKISHFWPHLAIPTNCSVKHALPMKRSIRPLFGVLLVIVFVATLICRTIVRRGLSSIELESRVLVRVPAPVLNGTLLKYAAIDIGEEKSKQEIQQLLDGNFGSQARHRTFVSWRRFIHHDITEKDSRSIPATLRSPLFYRYWLDFRKVLNNWARKKRFQPGIMSDLTGQVKLPIDRHNGLVGSEERYSSCAVVGNSGILLKTDYGELIDSHEVVIRMNNARVEKFEKKVGSKTSISFVNSNILHLCARRAGCYCHPYGPNVPMVMYICQPAHFLDYTVCNSSHKAPLLITDPRFDVLCARIVKYYSLKRFVEETGKPLEQWSSAHDGALFHYSSGMQAVMLALGICDRVSIFGFGKSASARHHYHTNQKAELHLHDYEAEYAFYHDLVDGHRPVPFLSDRFKIPPVVLYQ 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0485 425 Gene3D Glycosyl transferase family 29 133 407 IPR038578 -
Glsi04g0485 425 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 39 425 - -
Glsi04g0485 425 Pfam Glycosyltransferase family 29 (sialyltransferase) 197 404 IPR001675 GO:0006486|GO:0008373
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0485 Glsi-ChrGlsi04 3274241 3275518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0485 201 369 Glycosyltransferase AT1G08660 29.070 6.32e-10 58.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0485 04 3274241 3275518 Glsi04g0485 04 3274241 3275518 ECH