Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0463 ATGATACTGGTATCGCCTTCCCTCTCCTCTCTCCATGGAAATTTTAGCTTCTTTCCTTTCCGTACCACGCCAAACCCCGGTAGTTTTCTCACTATTCGATGCTCTTCGAGCGTGAACCAGATTGAGAAGCCATCCAACCCCCCCGAGGACAGAGAGTTGAGTTCCGAGCTATTCACTTCGGCCCCATTCCCTCCCATCAAGGCTGCCAAGAGAGTGGTGTTGGTCAGGCACGGCCAGAGCACCTGGAATGCCGAAGGCAGGATCCAAGGCAGCTCCGATTTCTCCGTTCTTACTAAGAAAGGTGAGGCTCAGGCCGAGACTTCGCGTCAAATGCTCATCGATGATAAGTTCGATGTTTGCTTCGCCAGTCCCTTGGCACGATCAAAGAGGACGGCTGAAATAATATGGGGAGCTCGTGAACAGTCGATAATTCCAGAATATGAATTGAGGGAAATCGATTTATATTCCTTTCAAGGCCTCTTAAAGCATGAGGGGAAAGCAAGATTTGGCTCAGTTTATCGCGATTGGCTAGTCAATGCTTCAAATTTCAACGTGGATGGTCATTATCCAGTGAGAGAGTTATGGGAACGCGCTAGGGGCTGCTGGCCTAAAATCTTAACTCATGATAGCAGGTCTATTCTTGTGGTTGCTCACAATGCTGTTAATCAGGCTCTTGTTGCAACAGCAATTGGTTTAGGGACTGAGTATTTTAGAGCTTTACTTCAGAGCAATTGTGGTGTGAGTGTGCTTGATTTCATCCCAAGATCTGAGGGTGGCTCTCCACATATCTGCCTTAACCGCTTAAATCAGACCCCTGGTTCACCTATTGCTGGTGGGAAATCTGGAGGCAGAGAGACAAGTAAGCAGATCATACTAGTTTGTCATGGATATACACAAGGCAATGCAGAGGATGGTTTTCTTTTAGCTGGGGATCAACAGTTGAACATGCTTGGTGTTATACAGTCCCAGAAATCTGCAGAGCTACTTCTTGATTTACAAGTGAATTCCATTATTAGCAGTCCTAATAATGCTTGTGTTGGGACAGCCATGGCCATCTCCCAAGTACAAGAAGCTGCTGATTGCTTGGGTGCTGACTGCGTGCCACGTTATGTTGAAATGAAGCAGATGGGAAACCTCGATGTCGAAACAATCATTCAGCAATCCAAAATGGATATATCTAGTTCTACGCCAATTCACCCTGGCTGGTTAAATGGAATTGAGGATGGGCTGAGAACAACATTATGGGATCAGTCTGGAAAGGCGTGGCAATCTCTGTTGGATGAACTATCTGACGAATCATCAGATGTAGTGGTTGTAGTAGGTCATCCTGCCATCCACATAGCACTGATGGGGCACGGCCTCAATTTGACGAAAGAATGGTTGGGATCATTTCATCTTGACGCAGGGAGCGTCAGCATCCTTGACTTCCCTGATGGGCCTAAGGAAAGAGGCGTCATCAGGTGTGTAAATTATACGGCACATTTGGGAAGATGGGCCATACCTATTACAAGATCGACGGCGGATGATGAAGAGTTTTAA 1539 0.4665 MILVSPSLSSLHGNFSFFPFRTTPNPGSFLTIRCSSSVNQIEKPSNPPEDRELSSELFTSAPFPPIKAAKRVVLVRHGQSTWNAEGRIQGSSDFSVLTKKGEAQAETSRQMLIDDKFDVCFASPLARSKRTAEIIWGAREQSIIPEYELREIDLYSFQGLLKHEGKARFGSVYRDWLVNASNFNVDGHYPVRELWERARGCWPKILTHDSRSILVVAHNAVNQALVATAIGLGTEYFRALLQSNCGVSVLDFIPRSEGGSPHICLNRLNQTPGSPIAGGKSGGRETSKQIILVCHGYTQGNAEDGFLLAGDQQLNMLGVIQSQKSAELLLDLQVNSIISSPNNACVGTAMAISQVQEAADCLGADCVPRYVEMKQMGNLDVETIIQQSKMDISSSTPIHPGWLNGIEDGLRTTLWDQSGKAWQSLLDELSDESSDVVVVVGHPAIHIALMGHGLNLTKEWLGSFHLDAGSVSILDFPDGPKERGVIRCVNYTAHLGRWAIPITRSTADDEEF 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0463 512 CDD HP_PGM_like 71 252 IPR013078 -
Glsi04g0463 512 Gene3D - 282 499 IPR029033 -
Glsi04g0463 512 SUPERFAMILY Phosphoglycerate mutase-like 70 266 IPR029033 -
Glsi04g0463 512 SUPERFAMILY Phosphoglycerate mutase-like 288 500 IPR029033 -
Glsi04g0463 512 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 74 83 IPR001345 GO:0003824
Glsi04g0463 512 FunFam Phosphoglycerate mutase 70 274 - -
Glsi04g0463 512 Gene3D - 70 272 IPR029033 -
Glsi04g0463 512 Pfam Histidine phosphatase superfamily (branch 1) 72 253 IPR013078 -
Glsi04g0463 512 Pfam Histidine phosphatase superfamily (branch 1) 290 479 IPR013078 -
Glsi04g0463 512 SMART PGAM_5 71 225 IPR013078 -
Glsi04g0463 512 SMART PGAM_5 289 449 IPR013078 -
Glsi04g0463 512 FunFam Putative 2-carboxy-D-arabinitol-1-phosphatase 281 499 - -
Glsi04g0463 512 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 285 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0463 Glsi-ChrGlsi04 3116290 3119784 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0463 04 3116290 3119784 Glsi04g0463 04 3116290 3119784 ECH