Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0437 ATGCAGCCGAATTTGTTCCCCTTTGGAAGCTTTCTGGGAAATCCGTTCATATCCAATGGTGATTTGAGTGAGGGGTTTGAGAGCTCTAGGGTTTTCTTCTTAGTTCCTTTCTTGCTCTTCCAGGGAGGAGGAATGGATTTGTCCAAGGTCGGGGAAAAGATCTTGAGCTCTGTTAGGTCTGCAAGATCGCTTGGACTGCTGCCCTCTGTTTCTGATCGGCCTGAGGTTCCACCTCAAGCTGCCGCTGCTGCAGCTGTTGCTCGTGCTCTTGCAGGATTGCCTCCTCATCAGCGGTATAGTCTCTCATCAAGTTCAGAAGAACTGAGTTCTATATATGGAAGCAGACCTCATGATCAAGTAGTGGAGGAGCTGGAGGATGAATTCTATGAGGAGGAGTTTGATCCAGTTAAACATATTTTAGAGCATGCTCCTGCTGAAGAAAATGAGCTGGCACATTTTGAGAAGCAGGCTGCCCTTAGATTGGCACAACTGGATAGAGTTGCAGAGCGTTTATCTCGCCATGTTATGGAGCATCATGAAGACATGCTTCCAGTCTTGACTGAGCTTCGACGTGGATTGGACATGCAATCAACACTTGAATCCCTTGTTGAGGAAGGGGATTACTGCAAGGCATTTCAAGTCCTATCTGAATTTTTGCAACTTCTAGATAGTTTGTCAGAACTTTCAGCAATACAAGAGATGAGTCGTGGTGTGGAGGTTTGGCTGGGAAAAACTCTACAGAAGCTGGATGCTCTGTTGTTGGGAGTATGTCAGGAATTTAAGGAAGATGGCTATATAACCGTAATTGATGCCTATGCATTAATTGGGGATATCACTGGTCTGGCTGAAAAGATACAAAGTTTCTTCATGCAAGAAGTTATCTCAGAAACCCACTCTGTGTTAAAGGATATTGTGTATGAGGATGAGGAGACACTGTCGCAAAATAGTAGTTTTTTGATCTATGTCATTCAGTCTAATAAAATTGGTCAATTTTATTCTCAGGACTCAGCAACCCAAACTTCAAATAAATGCAACGATGACATTTCCTGTAGTCCAGGTGAGGCTGTGAAAGTTGATTCAGAAGTAAGAACCTGCAGCAACTCCTTGACCAGTTGTGGAGATGAAATTCATGGTTCATTGTCAAGAGAAGAATCTGCAACAGCCAGCTCACTGGATGAAACTACCAACGCTACTGGTTTACCATGCATTGATTCTCATAATCTATTTAATGAGGCCAGAAAGGAGGACAATGCAGCGTCAACCATTGAATCCCCTTGGTACCATCTACGCAAAGAAGCTACAGAATTTGTTTCACAAACCCTTCAACGAGGACGCAAGAATCTTTGGCATCTCACTTCGAGCCGTGTGTCAGTATTGCTTTCTTCTGATGCAGCTTGTTCCACAAGCATTCATCAATTTTTGAAAAATTATGAAGATCTCAGTGTCTTCATTTTGGCTGGGGAATCCTTTTGTGGAATTGAAGCAGTTGAGTTCAGGCAGAAGTTGAAAGTGGTTTGTGAAAACTATTTCATAGCTTTTCATCGACAAAATGCTCATGCACTTAAAATGGTCTTGGAGAAAGAGAGTTGGTTAAAATTACCTCAAGATACAGTGGAAATTATCAGTTTTGCCGGACTAGTTGGTGATGGAGCTCCTTTGATTTCTTCATCTAACAGCAAATCAATTAATGCCACAGCAATTCATTCTGATAAATCAGTGAACTTGGTTCACAGTCACACCAGTGCTAGGAAAAGTGGATTCTCTCATTGGCTTAGAAGTGGAAACCCATTTTTGCAAAAATTATCAACTTCTAAAGAAGGCCAGTGTTACCCCCAATCTAATGGCTTGACTTATGGTGAATTTGATGGAAGCTCAAGCAACAACTTGTATGGTGATAAAGACTTGCCTGGAAAGAATGATTCCAATAAAATAAATGGTTCTAATTCTGTTTCAGAAGATGAAAATGAGGATCTTCTTGCAGACTTTATTGATGAAGACAGTCAACTGCCAAGTCGTATTTCAAAACCTAATCATTCAAGAAGAAAATCCTTACATTGTAATGATGAAGAAAATACTGCACAAACTGGATCTTCTTTATGTCTTTTAAGATCTATGGATAAATATGCAAGGCTTATGCAGAAATTAGAAGTAGTAAATGTTGAATTTTTTAAGGGAATATGCCAATTATTTGAGATTTTTTTCTATTTTGTATATGAAACATTTGGTCAGCAAAATAGTGGTTTAAGTGGAAAAGGCTCAGCTGATTCTCTTAATTATCGACTGAGGACCGCTATATCCAAAATAACTCAAGATTGTGACCAGTGGATAAAGCCCCAGTCATCTTCACCCACTTCTTTGAGTACATCATTTGTACATTCAGAGGTGACACCTACTAGCCCTTCGAGCACAAATTCGGGTCATTTCTCAGTGACATCTTTTGGACTAAAGGAAAGATGTGTGGCTGTTGACACCGTATCACTTGTTGCTCGAATATTGAATAGATCCAAAGCTCATCTCCAATCAATGCTTTTGCAAAGTAATGCAACTGTACTTGAGGATTTCTATGTGCATCTGGTGGATGCTGTACCAGATCTTACAGAGCACATTAATAGGACAACAGCAAGACTACTGCTGAACATTAATGGGTATGTTGAACGTGTTGCCAATTCTAAATGGGAAGTAAGAGAGCTTGGGCTAGAGCATAATGGATATGTTGATTTATTGCTGGGAGAATTTAAGCACTATAAAACACGACTTTTTCATGGGGGAATTCGAAAAGAGATTCAAGACTTACTTTTAGGCTATGGGCTTGAAATTGTGGCGGAAACTCTTGTAGAAGGACTTTCACGGGTGAAGAGATGTAGTGATGAAGGACGAGCTCTAATGTCATTGGATCTGCAGGTTTTGATCAATGGGCTGCATCATTTTGTGTCCATGAATGTGAAGCCCAAGCTACAGATGGTTGAAACCTTCATTAAGGCTTTCTACCTTCCAGAGACAGAATATGTGCACTGGGCACGCGCTCACCCAGAATACACAAAAAGTCAGATTGTTGGGCTGATCAACCTTGTTGCTTCAATGAAAGGTTGGAAGAGAAAAACCAGGTTGGAAGTATTGGAAAAGATTGAATGA 3132 0.4068 MQPNLFPFGSFLGNPFISNGDLSEGFESSRVFFLVPFLLFQGGGMDLSKVGEKILSSVRSARSLGLLPSVSDRPEVPPQAAAAAAVARALAGLPPHQRYSLSSSSEELSSIYGSRPHDQVVEELEDEFYEEEFDPVKHILEHAPAEENELAHFEKQAALRLAQLDRVAERLSRHVMEHHEDMLPVLTELRRGLDMQSTLESLVEEGDYCKAFQVLSEFLQLLDSLSELSAIQEMSRGVEVWLGKTLQKLDALLLGVCQEFKEDGYITVIDAYALIGDITGLAEKIQSFFMQEVISETHSVLKDIVYEDEETLSQNSSFLIYVIQSNKIGQFYSQDSATQTSNKCNDDISCSPGEAVKVDSEVRTCSNSLTSCGDEIHGSLSREESATASSLDETTNATGLPCIDSHNLFNEARKEDNAASTIESPWYHLRKEATEFVSQTLQRGRKNLWHLTSSRVSVLLSSDAACSTSIHQFLKNYEDLSVFILAGESFCGIEAVEFRQKLKVVCENYFIAFHRQNAHALKMVLEKESWLKLPQDTVEIISFAGLVGDGAPLISSSNSKSINATAIHSDKSVNLVHSHTSARKSGFSHWLRSGNPFLQKLSTSKEGQCYPQSNGLTYGEFDGSSSNNLYGDKDLPGKNDSNKINGSNSVSEDENEDLLADFIDEDSQLPSRISKPNHSRRKSLHCNDEENTAQTGSSLCLLRSMDKYARLMQKLEVVNVEFFKGICQLFEIFFYFVYETFGQQNSGLSGKGSADSLNYRLRTAISKITQDCDQWIKPQSSSPTSLSTSFVHSEVTPTSPSSTNSGHFSVTSFGLKERCVAVDTVSLVARILNRSKAHLQSMLLQSNATVLEDFYVHLVDAVPDLTEHINRTTARLLLNINGYVERVANSKWEVRELGLEHNGYVDLLLGEFKHYKTRLFHGGIRKEIQDLLLGYGLEIVAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLHHFVSMNVKPKLQMVETFIKAFYLPETEYVHWARAHPEYTKSQIVGLINLVASMKGWKRKTRLEVLEKIE 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0437 1043 Pfam Vacuolar-sorting protein 54, of GARP complex 181 313 IPR019515 -
Glsi04g0437 1043 MobiDBLite consensus disorder prediction 629 653 - -
Glsi04g0437 1043 Pfam Protein of unknown function C-terminus (DUF2451) 813 1043 IPR019514 -
Glsi04g0437 1043 MobiDBLite consensus disorder prediction 669 689 - -
Glsi04g0437 1043 PANTHER UNCHARACTERIZED 181 1043 IPR040047 GO:0032456|GO:0042147|GO:1990745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0437 04 2869307 2896122 Glsi04g0437 04 2869307 2896122 ECH