Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0394 ATGTCACATCACAAGGATGGAGATTTTGTCCGTGGTGGCTTTGATTATCGTGATAGAGTGAACTCTATAAAAGATTTTGCAAAGATGTTGGAAATACAGAGGTTGGTAATGCAGAGAGAAGTTTATAAGTGGTTGGTTCCTGATTTGAAGATGAGCAATTCATACCCTGAAGATCACGAAGAAGCAACCGTCGCAGGATTTGAAGTTCCAAAGTCTCCTGATTCCAGTTACAACAACGAGTACCCTGGAAATGAAGACGAGGCGCGTGATCCACCCGCTGTCCCTCCACATTTGCAACACACATTGCTCCGCAATCCTGCTAGTAGAAGCACTTCAGGGGCTGTTCCACTGCCCCAAAACGTGATTCTTAATCATCTTTATATCGAGAACAGAGAGGCTCCAAGATCTGTGGTGGCGTTAGGATTTACTCATCGCTTCCGATCTAAATATGTTACAGTTATGCTTTACAAACCAGTCCCAAGGGGGAGTACAAGCATTTAA 501 0.4391 MSHHKDGDFVRGGFDYRDRVNSIKDFAKMLEIQRLVMQREVYKWLVPDLKMSNSYPEDHEEATVAGFEVPKSPDSSYNNEYPGNEDEARDPPAVPPHLQHTLLRNPASRSTSGAVPLPQNVILNHLYIENREAPRSVVALGFTHRFRSKYVTVMLYKPVPRGSTSI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0394 166 Gene3D - 63 159 - -
Glsi04g0394 166 SMART AMPKBI_2 70 159 IPR006828 GO:0005515
Glsi04g0394 166 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 88 158 IPR006828 GO:0005515
Glsi04g0394 166 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 53 161 IPR043554 -
Glsi04g0394 166 SUPERFAMILY AMPKBI-like 62 159 IPR037256 -
Glsi04g0394 166 MobiDBLite consensus disorder prediction 66 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0394 Glsi-ChrGlsi04 2578083 2579887 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0394 04 2578083 2579887 Glsi04g0394 04 2578083 2579887 ECH