Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0371 ATGGCCGGAAAAGCTGCATCGACTACGACGACATACTCGCCGTCTCCGACCACGCAGAAAACCAGAGCGCCTATTTTCAAGGACGATTGGGTCCGACCCGATGGCCGCGGCTTCCACCAGTGCAGGCCTGCCTTTTTCAGAACTGGTGCTGTGAATGCTGCCTCTGGATCTGCTTATGCAGAGTTCGAAAATACCAAGGTCATCGTATCTGTATTTGGGCCCAGAGAGAGTAAGAAGGCAATGATGTACAGTGATACAGGGCGTCTAAATTGCAATGTGAGCTTTACAACATTTGCAACTTCAGTTCGTGGCCAGGGATCAGACCACAAAGAGTACACTGCGATGCTTCATAAAGCTTTGGAGGGTTCAGTAATGTTGGAAACATTTCCCAAGACAACTGTGGATGTTTTTGCATTGGTATTGGAATCTGGCGGCAGTGATCTCCCAGTTGTCATATCATGTGCTAGCCTTGCCCTAGCAGATGCTGGAATAATGATGTATGATCTTGTTGCCTCAGTTTCTGTGTCCTGTGTTAGTAAGAACCTTATCATTGATCCTATTTTGGAGGAGGAAAATTGCCAAGATGGATGCCTGATGATAAGTTGCATGCCTTCTCGTTACGAAGTCACCCAACTCACTGTTACCGGGGAATGGTCCACTCCAAAGTTTAACGAGGGAATGCAGCTGTGTCTAGATGCTTGTGCAAAGCTTGCGAAGATCATGAGGTCATGTTTGAAAGAAGTTGCTTCGGCTTCACAATAA 762 0.4698 MAGKAASTTTTYSPSPTTQKTRAPIFKDDWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFENTKVIVSVFGPRESKKAMMYSDTGRLNCNVSFTTFATSVRGQGSDHKEYTAMLHKALEGSVMLETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVASVSVSCVSKNLIIDPILEEENCQDGCLMISCMPSRYEVTQLTVTGEWSTPKFNEGMQLCLDACAKLAKIMRSCLKEVASASQ 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0371 253 Pfam 3' exoribonuclease family, domain 2 168 227 IPR015847 -
Glsi04g0371 253 SUPERFAMILY Ribonuclease PH domain 2-like 166 248 IPR036345 -
Glsi04g0371 253 PANTHER EXOSOME COMPLEX COMPONENT 32 245 - -
Glsi04g0371 253 SUPERFAMILY Ribosomal protein S5 domain 2-like 27 192 IPR020568 -
Glsi04g0371 253 FunFam Exosome complex component RRP41-like 11 250 - -
Glsi04g0371 253 MobiDBLite consensus disorder prediction 1 22 - -
Glsi04g0371 253 Gene3D - 18 252 IPR027408 -
Glsi04g0371 253 CDD RNase_PH_MTR3 41 247 - -
Glsi04g0371 253 Pfam 3' exoribonuclease family, domain 1 40 164 IPR001247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0371 Glsi-ChrGlsi04 2362277 2366313 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0371 04 2362277 2366313 Glsi04g0371 04 2362277 2366313 ECH