Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0368 ATGGAGACAGAAACAGAGATGAAACAATCCAAGTTCAAGAGGATTTGTGTGTTCTGTGGGAGTAGCCCCGGGAAGAAGAGCGATTATAAGGATGCTGCTATTGAGCTTGGAAGGGAATTGGTGTCAAGGAATATTAATCTGGTTTATGGAGGGGGCAGCATTGGTTTGATGGGGTTGATTTCTAAAGCTGTTCATAATGGTGGTCGCCATGTAATTGGAGTTATTCCCAAGACACTGATGCCGAGAGAGATAACTGGAGAAACAGTGGGTGAAGTGAAGGCAGTAGCAGACATGCATCAAAGGAAAGCGGAGATGGCTAAACATTCTGATGCTTTTATTGCCTTACCCGGTGGGTATGGGACACTTGAGGAGCTTCTTGAGGTGATAACCTGGGCTCAACTTGGCATCCATGATAAACCAGTGGGATTATTGAATGTGGATGGATACTACAATTCCTTGTTATCTTTCATTGACAAAGCAGTAGAGGAGGGATTCATTAGCCCCAGTGCTCGCCATATACTTGTCTCTGCCCCAACACCAAAAGAGCTTATAAAAAACATGGAGGAATATATCCCAAAACACGAACGAGTTGCCTCTAAGATCAGCTGGGAAATTGAGAAGCTCTCAAAATATGAAGTCTCAAGGTGGGACGTTGAATCTACTTCAACTTGCGAAATGGGTTTTGGTGGTAATTCAACATCGAGAAGTGGGGATTACTTGGAAGGGATGATTAATGAGTATGTTGGAGGAAAGGCTAAAATGAAGGCTCAAAGAAGTGGGTCTTCTAAGCTTGTGGCAGCTCTCACATGTCTTCAGTTTTTCTTCGCTGTTTATGCAACATTCCTGTTGTACTATATGAGCCCTACTATAGATTTACGAACCAAACCAGATTTTACGTGGGCTACCCGTATTGCTCAACAATGGAAGCATCTTATGATCACACCCCACGTACTGGGTCGCTACCAAGAAGCTTCTTCTCTCATCCGAGATGATATTCAATTTCAACCCATTAATCCATCTGAAGTTTGTGAGCATGAGAAGATCGATTTCATGCAGAAAAAGTCCAAAGATATCCAAATGATCAAGTTGAAGACAGAGCTTTACGACGAGGTTTTGAAGTTCCAAAGCAAAACCATTGGTACAGAGACTCTTTCTGAACTGATGGGAATGAAATCCAAATGGGATTTGAGAGGTCCAAACAGACCCAAAATCACAGTCATACTAAACCACTTCAAGAGAAAGACACTCTGTGCTCAGATTGATTCTTTGCTTCGGCAGACCCTCCCATTCCATCATGTTTGGGTACTTTCATTTGGGAGCCCAAATGAGCTCTCACTGAAGAGAATTGTAGATAGCTATAACGATTCAAGAATCAGCTTCATAAGCTCAAGTTACGATTTCAAGTACTATGGAAGGTTCCAAATAGCTTTGCAGACTGAAGCTGATCTTGTGTACATTGTTGACGATGACATGATTCCTGGTAGGAAGATGCTGCAGATATTGGCACATGTGGCTGGGACAGACAAGTACAAGAACTCTGTTTTGGGCAGCATAGGAAGGATATTGCCTTTCAGACAGAAGGATTTTACATTCCCAAGTTACAGAAAATTCAGGTCTAAAGAAGCAGGCCTATATTTGCCGGATCCTGCCTATAATATCACAATTGATAAAATAGTACAGGTAGATTTCCTATCCAGCTCTTGGTTTTTATCCGCTGAAATTGTCAAAACCTTGTTCATCGAGACACCTTTTACCTTCGCAACCGGTGAAGATCTGCACCTCAGCTATCAGCTTCAGAAGTACAGAAATGCTGGCTCTTTTGTTCTTCCAGTTGATCCGAACGATAAAGAAACTTGGGGTGACAGTGAACACAGGCTTGCTTATGTCTCTGAAACCACCGTAATCTTCAAAGACATTGTTCAAGTCCGAGATGATCAATGGTGGAAAGCACTTTCTACTGGTTATATCACCCAGTGGGCTGCAATGTACCCTCAAAAAATTGATGCACTCTTTTATGCTCATTCTGTTGATGAAGTTAAAGCACTTGCACCTCTTCTTGAGAAGTTTAGGTCCACAGTTGGCAAGAAGGCCTACATTGTTGTCTCTGGAAACAATTTCTGCCCTTGCGAAGATGCTGCATCTGCCCTAAATTGGCCTAGGTTGGTATGTAAAGAGAGGAGGTTTAAGATCTTTGACGTGGCAATTGGAGCAATTTCTGGTATATCAAACTCAGAGGTTCCAGTTATACACGCAGTGTACTCTAGCATGAGGGGGTTGATCAGAATTCACAATCCCAGTGTGGTAATCTCTGTAGCTGATATTGACCCTAATGTGAAGAAAGCTTTAAAGATGGCAACAGAAGCTAATTCAAATGCTACCGCTCTGGTTCTTTTGCCAAGGGCTTCAGTTTCAAAAGTTCTTTGGATGGCTGATCTGCGTCCAACAGCATTGCCAAATTGGAATAGAATGCGGATTTCTGTCAACATTATCACCCAAAACCGAGCCCATTCGCTAGCAAGGCTTCTCAAATCTCTCACTGATGCTTACTATCTGGGAGATGAGGTTTCTATTACCTTCAATATGGACAGTAAAGTGGACGAAGCAACTATAAGGCTAGTAAGTTCATTTGAGTGGCCTCATGGACCCAAGACCCTCAGAAGGAGAATCATCCAAGGAGGGCTGATTCGAGCTGTCAGTGAGAGTTGGTATCCCTCTTCTGATGATGACTTTGGGCTCCTACTCGAAGATGATATCGAAGTTTCACCTTATTATTACCTATGGATCAAATATGCACTCCTAGCTTACCACTATGATCCCCTAGTCTCTCTCCCCGAGCTCTCCTCCATCTCCCTCTACACCCCAAAACTTGTTGAAGTTGTCAAGGAAAGACCCAAATGGAATGCCACTGAGTTTTTCAAACCCATCCATCCAAACACACCTTACCTACACCAATTACCATGCAGTTGGGGTGCAGTTTTCTTCCCTAAGCAGTGGAGAGAGTTCTATGTTTATATGAACATGAGGTTCACTGAGAATGCGAAGGAAAATCCAGTTCAAATTCCGAAGTCCAGAACAAATGGGTGGCAAGCTTCATGGAAGAAGTTCCTCATAGACATGATGTACCTGAGGGGGTATGTTAGTCTCTATCCAAATTTCCCAAACCAAGCAAGCTTTTCAACCAACCATATGGAACCGGGGGCTCATATTAGTGCCAAGGATAACGTGGTTAGGCATGACAAAAATGACTTTGAGGTGCCCTTGTTGAATGAAGATTTCAGAACTTTGTTGCCAGGAACGAAATTGCCTCCAGCTTCAAAGTTGCCATCTTTGAACCTCTTCAATCAGCCAGTTTCTCTCAAGGGTTTGAAGGCTGCTGGGGCTAAGTTGGGTCAGGATGTGCTTAGATGTGACAACGCCACTGAGATAGTATCCGTGGATCATAATACGGGTCTACCACAGAGCTGCTCCAAATTCTGA 3477 0.4317 METETEMKQSKFKRICVFCGSSPGKKSDYKDAAIELGRELVSRNINLVYGGGSIGLMGLISKAVHNGGRHVIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPSARHILVSAPTPKELIKNMEEYIPKHERVASKISWEIEKLSKYEVSRWDVESTSTCEMGFGGNSTSRSGDYLEGMINEYVGGKAKMKAQRSGSSKLVAALTCLQFFFAVYATFLLYYMSPTIDLRTKPDFTWATRIAQQWKHLMITPHVLGRYQEASSLIRDDIQFQPINPSEVCEHEKIDFMQKKSKDIQMIKLKTELYDEVLKFQSKTIGTETLSELMGMKSKWDLRGPNRPKITVILNHFKRKTLCAQIDSLLRQTLPFHHVWVLSFGSPNELSLKRIVDSYNDSRISFISSSYDFKYYGRFQIALQTEADLVYIVDDDMIPGRKMLQILAHVAGTDKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYNITIDKIVQVDFLSSSWFLSAEIVKTLFIETPFTFATGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWGDSEHRLAYVSETTVIFKDIVQVRDDQWWKALSTGYITQWAAMYPQKIDALFYAHSVDEVKALAPLLEKFRSTVGKKAYIVVSGNNFCPCEDAASALNWPRLVCKERRFKIFDVAIGAISGISNSEVPVIHAVYSSMRGLIRIHNPSVVISVADIDPNVKKALKMATEANSNATALVLLPRASVSKVLWMADLRPTALPNWNRMRISVNIITQNRAHSLARLLKSLTDAYYLGDEVSITFNMDSKVDEATIRLVSSFEWPHGPKTLRRRIIQGGLIRAVSESWYPSSDDDFGLLLEDDIEVSPYYYLWIKYALLAYHYDPLVSLPELSSISLYTPKLVEVVKERPKWNATEFFKPIHPNTPYLHQLPCSWGAVFFPKQWREFYVYMNMRFTENAKENPVQIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPNQASFSTNHMEPGAHISAKDNVVRHDKNDFEVPLLNEDFRTLLPGTKLPPASKLPSLNLFNQPVSLKGLKAAGAKLGQDVLRCDNATEIVSVDHNTGLPQSCSKF 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0368 1158 CDD Glyco_tranf_GTA_type 406 505 - -
Glsi04g0368 1158 Gene3D - 2 189 - -
Glsi04g0368 1158 Pfam Possible lysine decarboxylase 57 187 IPR031100 -
Glsi04g0368 1158 SUPERFAMILY Nucleotide-diphospho-sugar transferases 822 1009 IPR029044 -
Glsi04g0368 1158 PANTHER OSJNBA0004B13.7 PROTEIN 506 1149 - -
Glsi04g0368 1158 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 392 611 IPR029044 -
Glsi04g0368 1158 NCBIfam Rossman fold protein, TIGR00730 family 13 190 IPR005269 GO:0009691|GO:0016787
Glsi04g0368 1158 SUPERFAMILY Nucleotide-diphospho-sugar transferases 399 601 IPR029044 -
Glsi04g0368 1158 FunFam CASP-like protein 3 189 - -
Glsi04g0368 1158 SUPERFAMILY MCP/YpsA-like 11 190 - -
Glsi04g0368 1158 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 824 1073 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0368 Glsi-ChrGlsi04 2338678 2347322 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0368 04 2338678 2347322 Glsi04g0368 04 2338678 2347322 ECH