Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0355 ATGCCCTCCGATATGAGTTCTTCCACTTCCGACCACGGTCTTGACCCTGCGCCTCAATCGATCGAAGAACGGTTGAATTCGGTCACATTGACCCTCTCCGATGGCGAACCATCGGCGCAACAAGAAGCGAACGGCGTTGTCAGTGGGTCCGTCAATCACGGCACTCAACTCGTAACGGAGGAACAGGTTCAATGCAGTACGATTGCTGCTGATGAATCTCGAGAGGTTACGGAGTCTTCCCACCACGGTGTCGTTTGGGGGAGGACCGTTTCGGAGCTCGAAATAGATGGACCGTCCAGCCCTAGTAGTAGTGGATATGCTGGTGAAAGGGGCAGTAGCAGTGCGACTAGTGCGTCGATAATTGACGATGTCGTTGAACAGGAAATAGAGGATGTGAGGAGTGATGTTACCGTCGATGACATCTCTGATACGCACACGTCGTGGCTTCCCGGGAAACGACATGAGGACGAGGATGATGCTTCCATATCATGGAGGAAAAGGAAGAAGCATTTTTTTATTCTGAGTCATTCTGGCAAACCAATATATACTAGATATGGAGATGAACACAAACTTGCAGGATTTTCGGCTACTTTGCAAGCGATAATTTCCTTTGTGGAGAATGGGGGTGACCGTGTCAAATTGGTGAGGGCTGGAAAGCATCAGGTGATCTTTCTTGTGAAAGGACCAATTTATTTAGTTTGCATCAGTAGCACTGAAGAACCTTACGAGTCCTTAAGGGGGCAATTGGAGCTTATTTATGGTCAGATGCTTGTTATATTAACAAAGTCTGTAAACAGATGTTTCGAGAAGAACCCAAAATTTGATATGACACCATTGCTTGGAGGAACAGACATTGTCTTCTCTTCTCTGATACATTCTTTCAGTTGGAATCCAGCTACATTTCTTCATGCCTATACTTGTCTCCCTCTTGCATATGCTACAAGGCAAGCCGCAGCTGCTATCTTGCAAGACATTGCTGATTCAGGTGTTCTGTTTGCAATACTAATGAGCAGGCACAAGGTAGTCAGTCTTGTTGGTGCTCAGAAAGCTTCTCTTCATCCAGATGATATGCTGTTGCTGGCCAATTTTGTTATGTCTTCAGAATCCTTCAGGATGTCAGAATCATTTTCTCCAGTTTGCTTGCCAAGATATAATCCTTTTGCATTTTTGTATGCTTATATCCATTTTTTTGATGCTGACACATACTTGATGTTGTTAACCACTAGTTCAGATGCCTTTTATCATCTTAAGGATTGCAGGATTCGTATCGAATCGGTCCTCCTGAAGTCAAATGTGCTTAGTGAAGTTCAGAGATCCTTGCTAGATGGTGGAATGCACATTGAGGACCTGCTTGTTGACCCCTTACCCCGTTCTGGATCAGCTCCTCATTTGGGCCAGCACAGGCCTCCAACAGATTCTCCTGAAAGATTGAAAGAACCTTATTTTGGCGTTGGCGGTCCTGCTGGGTTATGGCATTTCATATACCGCAGTATATTTCTGGATCAATATGTAGCTTCTGAGTTCTCATCATCAATTAAAAGTCCTCAGCAGCAGAAAAGACTGTATAGAGCTTACCAGAAACTTTTTGCATCCATGCATGATAAAGGAATTGGGCCACACAAGACTCAATTTAGAAGAGATGAAAACTACGTTCTTCTGTGTTGGGTGACACAGGATTTTGAGCTTTATGCAGCCTTTGATCCCCTTGCAGACAAGGCCTTGGCAATAAAGACTTGCAACCGGGTTTGTCAATGGGTAAAAGATTTCGAAAATGAAATATTTTTGCTAGGATCTAGCCCCTTTTCATGGTGA 1812 0.4437 MPSDMSSSTSDHGLDPAPQSIEERLNSVTLTLSDGEPSAQQEANGVVSGSVNHGTQLVTEEQVQCSTIAADESREVTESSHHGVVWGRTVSELEIDGPSSPSSSGYAGERGSSSATSASIIDDVVEQEIEDVRSDVTVDDISDTHTSWLPGKRHEDEDDASISWRKRKKHFFILSHSGKPIYTRYGDEHKLAGFSATLQAIISFVENGGDRVKLVRAGKHQVIFLVKGPIYLVCISSTEEPYESLRGQLELIYGQMLVILTKSVNRCFEKNPKFDMTPLLGGTDIVFSSLIHSFSWNPATFLHAYTCLPLAYATRQAAAAILQDIADSGVLFAILMSRHKVVSLVGAQKASLHPDDMLLLANFVMSSESFRMSESFSPVCLPRYNPFAFLYAYIHFFDADTYLMLLTTSSDAFYHLKDCRIRIESVLLKSNVLSEVQRSLLDGGMHIEDLLVDPLPRSGSAPHLGQHRPPTDSPERLKEPYFGVGGPAGLWHFIYRSIFLDQYVASEFSSSIKSPQQQKRLYRAYQKLFASMHDKGIGPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKALAIKTCNRVCQWVKDFENEIFLLGSSPFSW 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0355 603 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 187 207 IPR004353 GO:0006623
Glsi04g0355 603 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 581 601 IPR004353 GO:0006623
Glsi04g0355 603 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 568 581 IPR004353 GO:0006623
Glsi04g0355 603 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 272 284 IPR004353 GO:0006623
Glsi04g0355 603 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 552 566 IPR004353 GO:0006623
Glsi04g0355 603 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 221 235 IPR004353 GO:0006623
Glsi04g0355 603 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 301 322 IPR004353 GO:0006623
Glsi04g0355 603 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 374 397 IPR004353 GO:0006623
Glsi04g0355 603 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 402 428 IPR004353 GO:0006623
Glsi04g0355 603 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 169 186 IPR004353 GO:0006623
Glsi04g0355 603 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 325 338 IPR004353 GO:0006623
Glsi04g0355 603 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 349 365 IPR004353 GO:0006623
Glsi04g0355 603 MobiDBLite consensus disorder prediction 1 15 - -
Glsi04g0355 603 MobiDBLite consensus disorder prediction 1 47 - -
Glsi04g0355 603 PANTHER SAND PROTEIN-RELATED 52 601 IPR004353 GO:0006623
Glsi04g0355 603 MobiDBLite consensus disorder prediction 95 119 - -
Glsi04g0355 603 Pfam First Longin domain of FUZ, MON1 and HPS1 169 289 IPR043972 GO:0016192
Glsi04g0355 603 Pfam Second Longin domain of FUZ, MON1 and HPS1 330 421 IPR043971 GO:0016192
Glsi04g0355 603 Pfam Third Longin domain of FUZ, MON1 and HPS1 489 588 IPR043970 GO:0016192
Glsi04g0355 603 MobiDBLite consensus disorder prediction 91 119 - -
Glsi04g0355 603 MobiDBLite consensus disorder prediction 22 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0355 Glsi-ChrGlsi04 2234418 2240624 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1700 14 17390088 17396177 Glsi04g0355 04 2234418 2240624 CCT