Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0337 ATGACAAAGGAAATACGTTTGCCTTGTTCTATGCAGGAGGATGAAAAGAAAGTGACAAAGTTTTTGAAAATGAATTCAAGGGAAGGAGTGAATGATGGTCGAACCAGAATCAGACCAAATGATTCTCTTCTCCCTGGTCTTATTGATGATGTTGCCCTCAACTGTCTTGCATGGGTTAGTAGATCGGATTATGCTTCACTGTCTTGTATAAATAAAAGATACAATCATCTAATTAAAAGAGGGGATTTATATGGGCTGAGGAAACAGTTGGGATTTGTGGAGCATTGGGTTTATTTGGTGTGCGATCCAAGGGGATGGGAGGCATTTGACACCATGAAAAAGAAATGGATTCAATTGCCTAAGATACCTTGTGATGAGTGCTTTAACCATGCAGACAAAGAGTCCTTGGCTGTGGGCAGCGAACTGTTGGTTTTTGGTCGGGAATTGTTGGATTTTGCTATTTGGAAGTATAGCTTGATTTTTCGTGGTTGGGTTAAGTGTCAGGGGATGAACCGACCTCGATGTTTGTTTGGCTCTGGTAGTCTTGGTTCTATTGCTATCATTGCAGGTGGAAGTGATAAACATGGAAAAGTTCTAAAATCGGCTGAGTTGTATGACACTTCATCTGGTAAATGGGAGCAGTTACCAAACATGCACACACCACGTAGATTGTGCTCTGGTTTTTTTATGGATGGCAAATTCTACGTGATTGGTGGAATGTCAAGTCCTACGGTTTCATTGACGTGTGGAGAGGAGTATGATCTTGAGACAAGAAATTGGCGGAAAATAGAGGGTATGTATCCATATGTTAACAAGACTTCTCAGGCACCTCCACTGGTGGCAGTTGTGGATAATCAGTTATATGCAGTGGAGCATCTAACCAACATGGTGAAGAAATATGACAAGGTAAAGAATACCTGGAATGAATTGGGAAGGCTTCCAGTCCGAGCTGATTCTTCCAATGGCTGGGGCTTGGCTTTCAAGGCTTGTGGAGAGCAACTTCTGGTTGTGGGTGGTCAAAGAGGTCCAGAAGGTGAAGCTATTGTGCTGAATTCATGGTGTCCTAAGTCAGGGATCAAGAATGGCACCTTAGATTGGCAGGTCCTTGCTGTTAAGGAGCATGTTGGGGTGTTTGTGTACAATTGTGCTGTTATGGGTTGTTGA 1164 0.4278 MTKEIRLPCSMQEDEKKVTKFLKMNSREGVNDGRTRIRPNDSLLPGLIDDVALNCLAWVSRSDYASLSCINKRYNHLIKRGDLYGLRKQLGFVEHWVYLVCDPRGWEAFDTMKKKWIQLPKIPCDECFNHADKESLAVGSELLVFGRELLDFAIWKYSLIFRGWVKCQGMNRPRCLFGSGSLGSIAIIAGGSDKHGKVLKSAELYDTSSGKWEQLPNMHTPRRLCSGFFMDGKFYVIGGMSSPTVSLTCGEEYDLETRNWRKIEGMYPYVNKTSQAPPLVAVVDNQLYAVEHLTNMVKKYDKVKNTWNELGRLPVRADSSNGWGLAFKACGEQLLVVGGQRGPEGEAIVLNSWCPKSGIKNGTLDWQVLAVKEHVGVFVYNCAVMGC 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0337 387 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 39 387 - -
Glsi04g0337 387 Gene3D - 97 373 IPR015915 GO:0005515
Glsi04g0337 387 CDD F-box_AtAFR-like 43 87 - -
Glsi04g0337 387 Pfam Kelch motif 221 266 IPR006652 GO:0005515
Glsi04g0337 387 Pfam Kelch motif 173 218 IPR006652 GO:0005515
Glsi04g0337 387 SUPERFAMILY Kelch motif 104 344 IPR015915 GO:0005515
Glsi04g0337 387 FunFam F-box/kelch-repeat protein SKIP11 89 371 - -
Glsi04g0337 387 SMART kelc_smart 185 232 IPR006652 GO:0005515
Glsi04g0337 387 SMART kelc_smart 233 285 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0337 Glsi-ChrGlsi04 2157997 2159160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0337 47 264 Miscellaneous Gene Families AT4G33900 25.688 7.81e-12 64.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0337 04 2157997 2159160 Glsi04g0337 04 2157997 2159160 ECH