Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0323 ATGACGATGAACCAATCTCTCTTGCCCTTCTCACTACCACTACTAGTATTCCTCCTCTATTCCACCACCACTTCAGCCCTAGCTCCGGCAGTGGCCCCAGTAAAAGCTGCCCCAGTTCCATCGGCTGCAGCCCCTGCAGCCTTAGTCCCCACATTACCCCAGACTCCCTCCGACAATACCCCTGACACTGCTGCCACTGACATCATCGGAATCCTCAGGAAGGCCAAATCGTTCAGCTTCCTGATTCGCCTCCTCAAAACCACCCAGTTGATTAACCAAATCAATTCACAGCTCATAACTACAAAATCTGGAGGATTAACCATTCTAGCACCAGATGACAGTTCCTTTTCAGAACTCAAAGCTGGGTTCCTCAACTCTCTGAGTGACGGGCAAAAGCTCGAGCTTTTACAGTTCCACATTTTTCCCAACTACGTCTCAAGCTCAAATTTTGACACTCTGACCAACCCAGTTCGAACACTGGCCGGCGATAAACCCAGCAGGCTGCAGCTAAACGTGACCAGTTACGGTGGCAGCGTGAACATTTCAACAGGGGTGGTTAATACCACGGTGAATGGAATTGTATATACGGATAAGCGTCTTGCTATTTATAAGGTGGGCAAGGTTCTTCTTCCTCTGGACTTCTTTGCCGCTAATACACCAGCAGCAGCACCGGCATTGTCACCGGCAATTGCTACAGCAAAGGCTCCTAAAGCTGATAAGGATCCATCACCCCCAGATTCCTCAGATTCATCGCAGGTTGTTCCCTCTAAGGAGGACTCTGGTACAGCGAGAATCAGCATGCACGGAATGTGGGTGTCCCTTGGAGTTGTTTTCATTGCAGTATTGACAGCGTGA 855 0.4959 MTMNQSLLPFSLPLLVFLLYSTTTSALAPAVAPVKAAPVPSAAAPAALVPTLPQTPSDNTPDTAATDIIGILRKAKSFSFLIRLLKTTQLINQINSQLITTKSGGLTILAPDDSSFSELKAGFLNSLSDGQKLELLQFHIFPNYVSSSNFDTLTNPVRTLAGDKPSRLQLNVTSYGGSVNISTGVVNTTVNGIVYTDKRLAIYKVGKVLLPLDFFAANTPAAAPALSPAIATAKAPKADKDPSPPDSSDSSQVVPSKEDSGTARISMHGMWVSLGVVFIAVLTA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0323 284 SMART fasc_3 107 212 IPR000782 -
Glsi04g0323 284 SUPERFAMILY FAS1 domain 58 212 IPR036378 -
Glsi04g0323 284 FunFam Fasciclin-like arabinogalactan protein 11 51 211 - -
Glsi04g0323 284 MobiDBLite consensus disorder prediction 233 261 - -
Glsi04g0323 284 Gene3D FAS1 domain 44 211 IPR036378 -
Glsi04g0323 284 MobiDBLite consensus disorder prediction 245 259 - -
Glsi04g0323 284 ProSiteProfiles FAS1/BIgH3 domain profile. 65 209 IPR000782 -
Glsi04g0323 284 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8 265 IPR045003 -
Glsi04g0323 284 Pfam Fasciclin domain 77 211 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0323 Glsi-ChrGlsi04 2084596 2085450 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0323 04 2084596 2085450 Glsi04g0323 04 2084596 2085450 ECH