Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0298 ATGCAAAACTTGTTTCTCAGAGAAAACGAAAGAAAAGAAAAGATGAGAATTAGCAATCACTTGATTGGTCTTGTAAACTTCTTGACGTTCTTGGTCTCGATTCCAATACTGGGAGGTGGGATATGGCTGAGCAGCAGAGCCAACAACACGGACTGCCTCAAGTTCCTTCAGTGGCCGTTGATTGTCATCGGAGTAAGCATCATGGTGGTCTCTTTGGCTGGTTTCGCCGGCACCTGTTACCGCAACACTCTCCTGATGCGGCTCTACCTCGTCGTCATGTTTGTCATCATCGCCGTGCTTATCGGGTTCATCATCTTCGCCTATGTGGTCACGGACAAAGGGTCGGGTCGGGCGGTGATGAACAGGGCTTATTTGGAGTATCATCTGCAAGACTATTCGGGTTGGCTGGAGGAGCGAGTGGCGAGTGATAGCTACTGGGGGAAGATTAGCTCCTGTATTAGGGACTCCAAGGTATGCGGGAAGATGGGCAGAACTGTTGGTGGGGTGTCTGAGACTGCTGATATGTTCTACCTCAGAAAGCTCTCCCCTATCCAGTCTGGTTGCTGCAAGCCCCCAGAAGAGTGTGGGTATATTTATCAGAACGAGACAGTGTGGAACCCAGGAGGAGGAGTGGTGGGGACCGACCCTGACTGCACCAGCTGGAACAATGACCAAGAGCAGCTATGTTATGCCTGTGACTCTTGCAAGGCTGGTGTGCTGGCTAGCGTTAAGAAGAGCTGGAGGAGGGTCTCTGTGATTAACATTGTTGTAATGATCATCCTTGTAATCTTCTACATAATTGCTTATGCAGCTTATAGGAACAACCGCAGGATCGATAACGATGAACCCTCTGGCGAAGCCAGGATGACAAAGGCACAACCTAGCAGACTTCATTTTTAG 900 0.4956 MQNLFLRENERKEKMRISNHLIGLVNFLTFLVSIPILGGGIWLSSRANNTDCLKFLQWPLIVIGVSIMVVSLAGFAGTCYRNTLLMRLYLVVMFVIIAVLIGFIIFAYVVTDKGSGRAVMNRAYLEYHLQDYSGWLEERVASDSYWGKISSCIRDSKVCGKMGRTVGGVSETADMFYLRKLSPIQSGCCKPPEECGYIYQNETVWNPGGGVVGTDPDCTSWNNDQEQLCYACDSCKAGVLASVKKSWRRVSVINIVVMIILVIFYIIAYAAYRNNRRIDNDEPSGEARMTKAQPSRLHF 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0298 299 Pfam Tetraspanin family 20 268 IPR018499 GO:0016020
Glsi04g0298 299 PRINTS Transmembrane four family signature 53 79 - -
Glsi04g0298 299 PRINTS Transmembrane four family signature 20 43 - -
Glsi04g0298 299 PRINTS Transmembrane four family signature 80 108 - -
Glsi04g0298 299 PANTHER TETRASPANIN-8-RELATED 15 277 IPR044991 GO:0009734|GO:0016020
Glsi04g0298 299 MobiDBLite consensus disorder prediction 280 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0298 Glsi-ChrGlsi04 1923243 1926245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0298 15 291 Miscellaneous Gene Families AT5G60220 71.480 2.47e-129 369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1745 14 17734907 17737081 Glsi04g0298 04 1923243 1926245 CCT