Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0292 ATGGCGGCCTCTATGGCAGCATCGCGTTTATCCCATTCTCCCCACCATGCTATCCGTCAATCTTCACCCTCCGATATCGCATCTTTAACCACCTTCAAACTATACGATTTTCATCCGAAACGGTATCGGAACCTTTCCATTCGGGCTTCATTTCAGGGAGAAAACGACATAACCAAGAACGCCCAAGCTCTCGATTTGCAAAGAAGCGCCGATGACTTCCCAAGCGACGACATCGTCTCCAAAGATATGCTCGCCCTTCCGCGGCCATTGTCTTCAACTCAGTTCTCTGGTTCAGTTTCTGATGGATCCCGCCTTCGTGTTGGATACCAGGGGGTTCGTGGCGCTTATAGTGAGTCAGCCGCACAGAAGGCCTACCCGAATTGTGAAGCAGTGCCTTGCGACCAATTTGACACCGCTTTTGAAGCTGTTGAAAGGTGGATTGTGGACAGAGCAGTTTTGCCAATTGAGAATTCTTTAGGGGGGAGCATTCACAGAAATTATGACCTTTTACTCCGGCACAGGTTGCATATAGTAGGAGAAGTGAAATATGCAGTCCGGCATTGTCTGATGGCCAATCATGGTGTCAAACTTGAGGATTTGAAGCGGGTTCTTAGTCATCCACAGGCTCTTGCTCAGTGTGAGAACACATTGACAAGGTTAGGGTTGGTCAGAGAAGCAGTAGATGACACAGCTGGTGCTGCAAAGCATGTTGCTTTCCACAAACTACAAGATACAGGAGCAGTTGCTAGTTCTGCTGCTGCAGAGATCTATGACTTGAGTGTACTTGCTCAAGACATTCAGGATGATAGTGATAATGTCACCCGATTTCTAATGTTAGCACGAGAACCTATAATTCCAGGCACAGATAGGCCATTTAAGACAAGCATAGTTTTTTCTTTAGAGGAGGGTCCTGGGGTACTTTTCAAGGCGCTTGCTGTTTTTGCTCTGCGTCAAATTAACCTTACGAAGATTGAAAGTCGTCCTTTGCGAAAGCAACCATTACGGGCATCTGATGATAACAGCAATGGGTTTCCCAAGTACTTTGATTATCTTTTCTATGCATCTAAAGGAGTTTGCTACATTCTTGCGAGTGCTGGGGAGTTATCCAGTGGACACCAGCATGACATAAATAATCTCCAGAAGAGGACTCATCATATACTTACTGTTGTGTGCGGCATAGTTCTTTCGACTATCAAAGTAGAAAATTTGATTGGATGTATACAAGTTTCCTAA 1233 0.455 MAASMAASRLSHSPHHAIRQSSPSDIASLTTFKLYDFHPKRYRNLSIRASFQGENDITKNAQALDLQRSADDFPSDDIVSKDMLALPRPLSSTQFSGSVSDGSRLRVGYQGVRGAYSESAAQKAYPNCEAVPCDQFDTAFEAVERWIVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKYAVRHCLMANHGVKLEDLKRVLSHPQALAQCENTLTRLGLVREAVDDTAGAAKHVAFHKLQDTGAVASSAAAEIYDLSVLAQDIQDDSDNVTRFLMLAREPIIPGTDRPFKTSIVFSLEEGPGVLFKALAVFALRQINLTKIESRPLRKQPLRASDDNSNGFPKYFDYLFYASKGVCYILASAGELSSGHQHDINNLQKRTHHILTVVCGIVLSTIKVENLIGCIQVS 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0292 410 Gene3D - 190 269 - -
Glsi04g0292 410 CDD PBP2_Ct-PDT_like 106 283 - -
Glsi04g0292 410 MobiDBLite consensus disorder prediction 1 22 - -
Glsi04g0292 410 ProSiteProfiles Prephenate dehydratase domain profile. 106 281 IPR001086 GO:0004664|GO:0009094
Glsi04g0292 410 ProSitePatterns Prephenate dehydratase signature 1. 257 279 IPR018528 GO:0004664|GO:0009094
Glsi04g0292 410 FunFam Arogenate dehydratase 101 188 - -
Glsi04g0292 410 Gene3D - 284 357 - -
Glsi04g0292 410 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 58 354 - -
Glsi04g0292 410 SUPERFAMILY Periplasmic binding protein-like II 106 287 - -
Glsi04g0292 410 FunFam Arogenate dehydratase 189 269 - -
Glsi04g0292 410 SUPERFAMILY ACT-like 276 334 IPR045865 -
Glsi04g0292 410 Gene3D - 101 189 - -
Glsi04g0292 410 ProSitePatterns Prephenate dehydratase signature 2. 321 328 IPR018528 GO:0004664|GO:0009094
Glsi04g0292 410 CDD ACT_CM-PDT 293 353 - -
Glsi04g0292 410 Pfam Prephenate dehydratase 107 283 IPR001086 GO:0004664|GO:0009094
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0292 Glsi-ChrGlsi04 1895515 1899222 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0292 04 1895515 1899222 Glsi04g0292 04 1895515 1899222 ECH