Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0261 ATGGATGATGAATTGCTTGAGTTGCAGAGACAGTTCGAGTTCGCACAGCAAGCGAAGTCGAGCATTCGATTATCGGAGCGAAACGTAGTTGAATTAGTTCAGAAACTACAGGAGCTCCATATCATCGATTTCGACCTGCTTCATACTGTCTCTGGCAAAGAGTACATCACTCCTGAGCAACTGAGGAATGATATGGTCGCTGAAGTTAACAAGTTAGGGCGTGTTTCTCTGATTGATCTCGCTGATGCTACTGGGGTTGACCTGTACCATGTTGAGAAGCAGGCTCAACACATTATAAATGATCATCCTGAGATGATGTTGGTTCAAGGGGAAATCATGTCAGAATCTTACTGGGACTCGGTAGCTGAAGAAACTAATGAGAGGCTTCAGGAATGTAGTCAGATTGCACTCGCAGAACTTGCTGCACAATTAAATGTTGGTCTAGAGGTGGTTGCCTCCATGTTGGAGCCTCGCCTTGGCACCGTGGTGAAGGGAAGGCTTGAAGGTGGGCAGTTGTATACTCCTGCATACGTAGCTCGTGTTAGTGCCATGATTCGAGGTGCTGCCAGGGGCATCACAGTTCCAACAAATTTGTCAGTCTTATGGAGCTTGTTACAGCAATTACTACAAGAAATGGATGGAACCAGCGGTGTGGCTGTTGAAGGATCCTTCCTCCAGTATTTGTTTAATGGGCTTGTGAAGGAATGTGAGATTCTAGGATCACTTCGTGCAGGAATACACTGGACACCAGCTGTCTTTGCTATTGCGCAAAAGGAATCCGTGGATTCATTCTTTTCACAGAATTCTTTTATCAGCTACGAGGTTCTGCACAAACTAGGAATTCCCCAGCCCATTCAATTCTTGCAGTCCAGATACCCTGAAGGTATACCTCTAGATACAACATTTGTTCACCCGTCAGTGATTGAAATGCTGGATGCTGCTACAGAGGATGCTCTTGAGCGTGGTAGCTGGAGTGATTCTCTTTCCTTATTGCCTTCGTCCTTTACTCCTCAAGATGCATCTAAAATGTTGTCCTTTTGTCGATCTGTTCAATTGGCTCTTAAGTCTAACCAAGCATACATTTTTGGGGATTTTTATGTCTTGAGCAATAGCTTTATGAAGGACGTCTGTGACCGCCTGGTGAAAGAGATGGAAAAATTAGGTGTTTCGGGGCCTACTGGCACAAAGATGTCTGGTGATTCACAAGTAGCTAATGAAGCAAAAGTTGGGCATGATTTAGGCAGGTCGAATGAGTCAAGTGAAATGGCTATTGATCGCAGTGCCTTTAGACATGCTGATAAAGGGTCAAAGAAGAAAAAGGGAAAGGCCACTGGAAATGTTCCAGCAAATGTATCAGAAAGTGCTCCAGATATCCAGGAACAGACTTCCACAAAATCTAAAAAAAGCCAGAGAAGGAGCAAGGATACATCTTCACAAGTGTCAGATTCAAAAACAAGTTCTAGGAAAGATTCACTTAAGATGAAAGAGGATAATCTTAGCAGTCCTTCAGAAGAATGGATCATGCAGAAGATTATAACTTTGGTCCCAGATTTTGAAGAACAAGGTATGGATGATCCTGAAATAATTCTTAGGCCTTTGGCTAATTACTTAAGGCCTACAGTAATAGCTTCTTGGATGGAGAAGAAGAAGGCATTGTTTACAGAAAATGCAGAAAGAATGAAATGTTTGCTTGATAATTTGCAAAGGAAACTTGATGAGTCTTTCTTAAATATGCAGCTGTATGAAAAGGCATTAGAATTGTTTGAAGATGATCAATCAACCTCTGTTGTTTTGCATAGGCATTTACTGAGAACAGTAGCTGCTCCTATGGTGGATTTGCTTCTTCATAACTTGGATAAGCACAACAAATTAAAGAGTGGACTTGAAGTGGAGGAAGCTTCAAATTCAGAACTGGTTACTCTTAGTCCTGGAGACAGAGCTGCAATTTCTAAGAGTTTGCCTGGAGCACTTGCAAATGATGCTCTTGCTGTGGTTGAAGCATTGGAAGGAAAGCGGGTGGAAACATTTATGGATGCTTTTAGAGTGGTAACAGAAGAGAGTGGATTGCCTTTGAAAAGGCTTGACAAGAAACTAGAAAGAACACTTCTACATTCATTTCGCAAGGATTTGACATCTCAAATTTCTGCTGAGACTGACCCAGTATCACTTCTGGCAAAAGTTGTGTCTTTACTTTACATACAGGTTTACCACAAAGCTCTTCAAGCCCCTGGAAGGGCCATTTCTGTTGCCATCTCTCGATTGAAGGATAAACTAGATGAATCAGCATTCAAGATTTTAACTGAATATCAGACTGCCACAGTGACTCTTTTGGCATTATTATCAGCTGCAACGGGCGATGAAGAGGATTGCACATCTGATAGAATTTTGAGTAAAAGAGAGCTTCTGGAGAGCCACATGCCTGCCCTGAAAAGCTTGGTTTTGAGCACCTCACAATCTTCTCAAGGCCATGTGTAG 2475 0.4242 MDDELLELQRQFEFAQQAKSSIRLSERNVVELVQKLQELHIIDFDLLHTVSGKEYITPEQLRNDMVAEVNKLGRVSLIDLADATGVDLYHVEKQAQHIINDHPEMMLVQGEIMSESYWDSVAEETNERLQECSQIALAELAAQLNVGLEVVASMLEPRLGTVVKGRLEGGQLYTPAYVARVSAMIRGAARGITVPTNLSVLWSLLQQLLQEMDGTSGVAVEGSFLQYLFNGLVKECEILGSLRAGIHWTPAVFAIAQKESVDSFFSQNSFISYEVLHKLGIPQPIQFLQSRYPEGIPLDTTFVHPSVIEMLDAATEDALERGSWSDSLSLLPSSFTPQDASKMLSFCRSVQLALKSNQAYIFGDFYVLSNSFMKDVCDRLVKEMEKLGVSGPTGTKMSGDSQVANEAKVGHDLGRSNESSEMAIDRSAFRHADKGSKKKKGKATGNVPANVSESAPDIQEQTSTKSKKSQRRSKDTSSQVSDSKTSSRKDSLKMKEDNLSSPSEEWIMQKIITLVPDFEEQGMDDPEIILRPLANYLRPTVIASWMEKKKALFTENAERMKCLLDNLQRKLDESFLNMQLYEKALELFEDDQSTSVVLHRHLLRTVAAPMVDLLLHNLDKHNKLKSGLEVEEASNSELVTLSPGDRAAISKSLPGALANDALAVVEALEGKRVETFMDAFRVVTEESGLPLKRLDKKLERTLLHSFRKDLTSQISAETDPVSLLAKVVSLLYIQVYHKALQAPGRAISVAISRLKDKLDESAFKILTEYQTATVTLLALLSAATGDEEDCTSDRILSKRELLESHMPALKSLVLSTSQSSQGHV 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0261 824 Pfam E3 UFM1-protein ligase 1 4 288 IPR018611 GO:0061666|GO:0071569
Glsi04g0261 824 MobiDBLite consensus disorder prediction 486 500 - -
Glsi04g0261 824 MobiDBLite consensus disorder prediction 447 463 - -
Glsi04g0261 824 MobiDBLite consensus disorder prediction 411 432 - -
Glsi04g0261 824 MobiDBLite consensus disorder prediction 410 501 - -
Glsi04g0261 824 PANTHER E3 UFM1-PROTEIN LIGASE 1 2 819 IPR018611 GO:0061666|GO:0071569
Glsi04g0261 824 MobiDBLite consensus disorder prediction 464 478 - -
Glsi04g0261 824 Coils Coil 550 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0261 Glsi-ChrGlsi04 1654082 1663274 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0261 1 786 EF-hand Containing Proteins AT3G46220 62.262 0.0 966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0261 04 1654082 1663274 Glsi04g0261 04 1654082 1663274 ECH