Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0238 ATGGAAGAGAAGCGTCATAACGCAATCAATGCAATGACCATAGTCAAAGTTAGGTTCCGGGATTGGTTTGCATTTCATAACTTTTGGCTTCTTGTTTACTACCATTGGAATAGATATTTTCTCTCACTTGTCCTGTTTGCTTTGGCTTCCTTCCTCGTCATGCAGCGAGAAATGGAGGTCACTTCCAGAGGAAGAATATCAGAGCTCCAAATCCCGAAGAAATGGAAAGACAGAGACACCAGCCCTGAGAGAACCAAAGTCTGGACTGAACCTAAGCCCAAAACGGAGAGGAAAGTCTCTGTCGTTTACTATCTTTCCAGGAATGGCCAGCTCGAGCATCCCCATTTCATGGAGGTCCCTCTCTCCTCCCCTCACGGACTCTACCTCAGAGATGTAATCAACCGCTTGAACCTCCTCCGCGGCAAAGGCATGGCCAGCATGTACTCCTGGTCTGCAAAACGGAGTTACAAAAACGGCTTCGTTTGGCACGACTTGTCAGAGAACGATTTCATCTACCCAACGCAGGGGCAAGAGTACATTCTCAAAGGATCGGAGATTCTCGATGACTCTCCCATTCAAAGGCCTTTAGAAACGGCGTCGTCTCGGTCTCTTAGACCCCCTGAGGAAACGCCCAAGTCTGAGGATGATTCCGATTTTCCACTTATCACAAGGAGGCGCAACCAGTCGTGGAGCTCCATAGACCTCCACGAATACAGAGTTTACAAGTCTGGCTTGTTTGGTGACTCAGCCGGAAAAGTGGCCGCCGACGCGTCGACTCAGACGGATGATAAGCGACGGCGAAGGAGGGCGATCAGAGAAGAGAAAGCAATCGAAGAAGTGGAGGGAGAGAGGATACAGCCGGCGCAGGTGATTTGTCATAATCAAAGTACGGAGCTGAGCAGGGAAGAAATTTCACCTCCACCGTCCGATTCGAGCCCCGAAACACTTGAAACGCTGATGAAGGCAGATCGACGGCTTGCATTGTGCTCTACGAGAACCAATAAAGATGATGATGCGAATCAAAACTATCCAAATGGGAGGATGAAAGCGTCATCGGTTCTTATACAACTGTTATCGTGCGGTTCAATGTCTTTTAAGGCTTGTGGGCCCACTTCCGCTAAGGATCAAGGGTTCTCCTTGATCGGGCACTACAAGTCAAGGTTTCCCCGCGGAGCAGGGAATCAAGCAGGTAAAGAGGCCGGGACATCGATAGAAACTCCGGATTTGAGCGGGGTGAGATTGGAGGATAAGGAGTATTTTAGCGGGAGCTTGATCGAAACCAAGAAAGTGGACGCTCCTGCCTTGAAGAGGTCATCTTCTTACAATGCAGATAGTGGTTCCCAGGTGCAAGTCATAGAGCATGGAGACTCTGTGCGGGCAAAGTGCATGCCAAGGAAGTCCAAGACGCTGACAACAAAGAATTCTACAGGTGATGGCATGAATGTTAGCAGTGGTAGATTTCCGAGTATTGATTTGATTAACTTGTTGTGGCTGATGGGTCCTGTAAGAGGATTGAAAAAGAGAAAAAGGCCAGAGAAGAAGCATGACGAAAATGGGTGTGCTTCTGGGTCGCCGGAGAAAGAGGGCCCTGTAGATTGGTGGGATGAGTTCTCAAAGAGAATTAATGGTCTTCAACAGTCTCCCTCAAAGGGTTTGGATGGCTTTGAATCTGTTTTTAGGATCTCCAGAAAGACCTTTGAGTACATATGTTCACTTGTGAAGGATGATATGATGGCAAAATCTGCGCATTTTGTGTTTACAAATGGCAAGCCTATGTCTTTGTATGATCAAGTAGCCGCGGCACTGAGAAGACTGGGATCTGGTGAGTCACTAGTCACAATTGGAGATTCATTTGGGCTGAACCACTCAACAGTTTCGCAAGTTACTTGGCGATTCGTGGAGTCTATGGAAGAAAGGGCACTTCAGCACCTGCAATGGCCTTCTACAGAAGTGGAAATGACAGCAATCAAATCCAAATTTGAGAAAGTACGAGGCCTCCCCAATTGCTGCGGTGTAATTGATGCTACTCACATCACAATGTGTTTACCTGTCTCAGAACCTGCTAGTAATGTGTGGCTTGATCATGAAAAAAATCACAGCATGGTATTGCAGGCAATAGTGGATCCTGACATGAGGTTCAGGGACATAGTCACTGGCTGGCCAGGTAAAATGAAGGACTGGTTGGTCTTTGAGAGTTCAGATTTCTACAAACTTTGTGACAAAGGAGAGAGGTTGAATGGGAAGAAAGTACAGCTCCCTGAAGGATCAGAAATAGGGGAATATATAATTGGTGATTCAGGCTATCCTCTACTGCCTTACCTCATTGTCCCTTACGAAGGGAAAGAACTCCCAGAGCCAAAAGCAGAGTTTAACAGGCGGCATTTTGCTACCCGGATGGTGGCGCAGAGGGCACTGGCAAGGCTAAAGGAGATGTGGAGAATCATTCAAGGAGTGATGTGGAGACCTGACAAACATAGGTTGCCTAGGATTATTCTCGTCTGCTGCTTACTTCACAACATTATTATTGACATGGAAGATGAAGTGCAGGATGAACTCCCTTTGTCTCACAACCATGACTCAGGTTACCATCAGCTGATTTGTAGAGCTCTTGACATAAAGGGAGTATCACTTAGAGATGAGTTGTCTCTCTACTTGACTGGAAGATAA 2667 0.4702 MEEKRHNAINAMTIVKVRFRDWFAFHNFWLLVYYHWNRYFLSLVLFALASFLVMQREMEVTSRGRISELQIPKKWKDRDTSPERTKVWTEPKPKTERKVSVVYYLSRNGQLEHPHFMEVPLSSPHGLYLRDVINRLNLLRGKGMASMYSWSAKRSYKNGFVWHDLSENDFIYPTQGQEYILKGSEILDDSPIQRPLETASSRSLRPPEETPKSEDDSDFPLITRRRNQSWSSIDLHEYRVYKSGLFGDSAGKVAADASTQTDDKRRRRRAIREEKAIEEVEGERIQPAQVICHNQSTELSREEISPPPSDSSPETLETLMKADRRLALCSTRTNKDDDANQNYPNGRMKASSVLIQLLSCGSMSFKACGPTSAKDQGFSLIGHYKSRFPRGAGNQAGKEAGTSIETPDLSGVRLEDKEYFSGSLIETKKVDAPALKRSSSYNADSGSQVQVIEHGDSVRAKCMPRKSKTLTTKNSTGDGMNVSSGRFPSIDLINLLWLMGPVRGLKKRKRPEKKHDENGCASGSPEKEGPVDWWDEFSKRINGLQQSPSKGLDGFESVFRISRKTFEYICSLVKDDMMAKSAHFVFTNGKPMSLYDQVAAALRRLGSGESLVTIGDSFGLNHSTVSQVTWRFVESMEERALQHLQWPSTEVEMTAIKSKFEKVRGLPNCCGVIDATHITMCLPVSEPASNVWLDHEKNHSMVLQAIVDPDMRFRDIVTGWPGKMKDWLVFESSDFYKLCDKGERLNGKKVQLPEGSEIGEYIIGDSGYPLLPYLIVPYEGKELPEPKAEFNRRHFATRMVAQRALARLKEMWRIIQGVMWRPDKHRLPRIILVCCLLHNIIIDMEDEVQDELPLSHNHDSGYHQLICRALDIKGVSLRDELSLYLTGR 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0238 888 Pfam DDE superfamily endonuclease 673 839 IPR027806 -
Glsi04g0238 888 MobiDBLite consensus disorder prediction 506 532 - -
Glsi04g0238 888 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 76 476 IPR010369 -
Glsi04g0238 888 MobiDBLite consensus disorder prediction 296 315 - -
Glsi04g0238 888 MobiDBLite consensus disorder prediction 207 222 - -
Glsi04g0238 888 Pfam Protein SOSEKI, plant 99 445 IPR010369 -
Glsi04g0238 888 MobiDBLite consensus disorder prediction 191 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0238 Glsi-ChrGlsi04 1501730 1513491 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0238 04 1501730 1513491 Glsi04g0238 04 1501730 1513491 ECH