Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0157 ATGTCGGGTGGGTTCTTTCGAGGTACATCTGCGGATCAAGACACTCGGTTTTCGAACAAGCAAGCGAAGCTGCTGAAATCTCAGAAGTTCGCGCCTGAATTGGACCACCTGGTCGATATGGCAAAGGTGAATATGGAAGTGATAAAGCCATGGATTACGCGAAGGGTGACTGAGCTTCTTGGATTCGAGGATGAAGTGCTTATTAACTTTATACACAGTCTTCTGGATGCAAAGGAAGTGAATGGAAAAGAGGTCCAAATACAAATTACTGGATTTATGGAGAAGAACACTGGAAAGTTTATGAAAGAGCTTTGGACACTTCTTCTCAGTGCACAGAAAAATGCCAGTGGTGTTCCACAGCAGTTCTTGGATGCGAAAGAAGAAGAACTCAGGAAGAAGAAGGTTGAAAATGATAAAATAGCAAGTGAAATTCAGAAGAAAAGAGATAAGGAAGGTAGAGAGTTCATGCAAGAGAGGTTTAAGAAAATGGACGGTGGATTTGATGCCAACGATACTGACACTGCTTCAAACCCAGTCTTGAAGTCCAGGGATCCAGGAGATTACATACAGGATGGAAAAGAAACTGACAAGAGGAATGGTGTGAGAGCAAGGAACAGGTTTTCTAGGTCTCCTCATTCACCTGCAATTTCCAGTTCACCTAAACGAGGCTCGCCTTCTAGGTCAATGAGTAAATCTTTTTCAAATTCCCGAAGTTATTCAGGTGACAGACAAAGGTCAAGGAGCATATCTAGATTGCCAGAAGCACGAGGACGCTCTGTTTCTTCTGAAAGGATTCATCGTTCTCCACGAAGACAGTCTATTTCTCCTCCTCGGAGGCATTCACCTTGGCAATCTCCTCCTCGCAGGAGATCATCTTATTTAAGGCGAAGATCTGGATCACGCTCACATTACAGATCACCATCTCCTCTACGACGTAGAGTACGTTCTCCATTTCACCGCAGATCACCCTCTCCCGTGAGACGACGAAGATCACCCTCTCCTCTGAGACGACGCAGATCACCCTCTCCTGTGAGACGACGCAGATCGCCCTCTCCTGTGAGACGACGCAGATCACCCTCTCCTGTGAGACGACGTAGATCACCGTCTCCTGTGAGACGACACAGATCACCCTCTCCTTTGAGAAGGCACAGATCACCCTCTCCAGTGCGTCGTCGTAGATCACCATCACCTGCAAGACGACGGTCACCTTCATTTAGACAACGTAGATCACCTGTTTTGCGACATAGATCATCCTCTCCTATGCAATCCTTCTCTCCTGTACGCCGAAGGTATAGAACTCCAGAACATGGGTCTCCATCTCCTTTGAGGTGTAGGTCACCTGTTTCTGAACATAAATGGTCACTGAGTCCTCCCCCAAGAAGGTCTCTTTCTCCAGGTGAGTGGAGTTCACAATCTCCTGTACGGCATGTATCTCCATCACCAGTTAGGAGAAATTCCGTAAGACGCCTCAGAAGTCCTGTGCAGTCTTCTCAGGGGGGAGTCAGAAAACAAGAAAGATTGTTACCTGCACCTCGTCAATCCTCTAATCCTTTAAGGATTGTGAAGACAGATAAGGATCGCAACTCTTTGCACCATAAATCACAAAGTTCATTATCCTCACCTGAAAAGTCTCCAGTTCAGTCATTTTCACCACGAGCAAGGAATAGGACTTACAGAGAAGACAGTAGAGAGAGCAGGGATCCTAAATTAAAGTCATCAAAAAAGAAATCAAATTATTTATCCCCTGTCAGTAAGCAGAAAGATTCACCTGCAAAGTTTCATAATGAGGAGAAATCCTCTCCTGAAAGGGCAGCTGGCCATCTTGTTTCTGAATCTCATGGACATGACGATGATATTGTTCTGAGCAAGAGAGGTCAGGAAATGAACAGCGATAAATCTTCTGGAAGGGGTCCTGAAACTCCTACTCAACAGAAGTCATCCACGTATAAAGAATCTTTTTCCAGTGAGAGGCCTCATGAATCATATACTGCAGATGGTAAAAAATCTGATGAGAAGAACCACACCCATTCAAACCATGCCAAGGATAGTGATGGGCGTCACAAAACAGAAGGTGCTCAATATTCAGTTGGAAAAGTTGATCCTGTCAATCAGAGTGCTTCATATGATTCTGGTTCTGAGGAAAGTGGTAAGCGTAGAAGAGAAGGAAAGGATAGGAGAAAGCATAAAACATCTGAGAGAAAGGTTGTTGCTTCAGATGAGGAATCCAGCTATGATTCTGAATTGGAGGACAGGAAAGAGGCTAAGAGAAGGAAAAAAGAGGAGAGGAAACTACGTAAGGAGGAGAAGCGTCGGAGGCGTGAGGAGAAACGACGCAGAAGGGAAGAACGGCGTGCGGAAAAGCTGAAAATGAAGAGTAAAACAGACGATTATACTTCAGATGATGGCAAAGATGAAAGAAAGGATTCTCATCGAAGCAATAATGAAGAGACTCCATCTGACCAGAAGAAGCTTGAGATTGAATTGCGGAATAAGGCTCTTGAATCACTTAAAGCAAAGAGGGGCATGAATCACTAA 2535 0.4481 MSGGFFRGTSADQDTRFSNKQAKLLKSQKFAPELDHLVDMAKVNMEVIKPWITRRVTELLGFEDEVLINFIHSLLDAKEVNGKEVQIQITGFMEKNTGKFMKELWTLLLSAQKNASGVPQQFLDAKEEELRKKKVENDKIASEIQKKRDKEGREFMQERFKKMDGGFDANDTDTASNPVLKSRDPGDYIQDGKETDKRNGVRARNRFSRSPHSPAISSSPKRGSPSRSMSKSFSNSRSYSGDRQRSRSISRLPEARGRSVSSERIHRSPRRQSISPPRRHSPWQSPPRRRSSYLRRRSGSRSHYRSPSPLRRRVRSPFHRRSPSPVRRRRSPSPLRRRRSPSPVRRRRSPSPVRRRRSPSPVRRRRSPSPVRRHRSPSPLRRHRSPSPVRRRRSPSPARRRSPSFRQRRSPVLRHRSSSPMQSFSPVRRRYRTPEHGSPSPLRCRSPVSEHKWSLSPPPRRSLSPGEWSSQSPVRHVSPSPVRRNSVRRLRSPVQSSQGGVRKQERLLPAPRQSSNPLRIVKTDKDRNSLHHKSQSSLSSPEKSPVQSFSPRARNRTYREDSRESRDPKLKSSKKKSNYLSPVSKQKDSPAKFHNEEKSSPERAAGHLVSESHGHDDDIVLSKRGQEMNSDKSSGRGPETPTQQKSSTYKESFSSERPHESYTADGKKSDEKNHTHSNHAKDSDGRHKTEGAQYSVGKVDPVNQSASYDSGSEESGKRRREGKDRRKHKTSERKVVASDEESSYDSELEDRKEAKRRKKEERKLRKEEKRRRREEKRRRREERRAEKLKMKSKTDDYTSDDGKDERKDSHRSNNEETPSDQKKLEIELRNKALESLKAKRGMNH 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0157 844 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 1 840 - -
Glsi04g0157 844 MobiDBLite consensus disorder prediction 554 574 - -
Glsi04g0157 844 MobiDBLite consensus disorder prediction 463 479 - -
Glsi04g0157 844 MobiDBLite consensus disorder prediction 731 761 - -
Glsi04g0157 844 MobiDBLite consensus disorder prediction 626 651 - -
Glsi04g0157 844 MobiDBLite consensus disorder prediction 652 693 - -
Glsi04g0157 844 MobiDBLite consensus disorder prediction 210 246 - -
Glsi04g0157 844 SMART pwi_2 40 114 IPR002483 GO:0006397
Glsi04g0157 844 MobiDBLite consensus disorder prediction 186 203 - -
Glsi04g0157 844 MobiDBLite consensus disorder prediction 533 553 - -
Glsi04g0157 844 MobiDBLite consensus disorder prediction 762 778 - -
Glsi04g0157 844 Coils Coil 744 791 - -
Glsi04g0157 844 Pfam PWI domain 46 115 IPR002483 GO:0006397
Glsi04g0157 844 MobiDBLite consensus disorder prediction 779 838 - -
Glsi04g0157 844 Coils Coil 123 150 - -
Glsi04g0157 844 MobiDBLite consensus disorder prediction 290 413 - -
Glsi04g0157 844 Gene3D PWI domain 33 125 - -
Glsi04g0157 844 MobiDBLite consensus disorder prediction 247 270 - -
Glsi04g0157 844 ProSiteProfiles PWI domain profile. 27 125 IPR002483 GO:0006397
Glsi04g0157 844 MobiDBLite consensus disorder prediction 162 844 - -
Glsi04g0157 844 SUPERFAMILY PWI domain 25 133 IPR036483 GO:0006397
Glsi04g0157 844 MobiDBLite consensus disorder prediction 589 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0157 Glsi-ChrGlsi04 1116076 1120903 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0157 04 1116076 1120903 Glsi04g0157 04 1116076 1120903 ECH