Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0115 ATGTCGTCGTCAGCCGCTGCAGTCACTACTATCTCTGGTGGCGACTCCCCCGACCACCTTGAAACGCCTATTTTGGATAGGGACTCCCCTTGTCTCCTACACTCCATTTCCGAGCACGGTGGCTATGCTTACGTCAGTATAGCCGCTCTGGCCGTCGCCGGCGACTTTCGCGCTGCCGAAGCGGCTCGTGAGATGGCCTGGGAACAGCTGCACTCGGGGCCTTGGCACTCCGTCCTACCAGTATGGCGCGACGCCTACTCTATGGCATGCCTCTACGCTGCGAAGCACCATTACAGTAGTGGTGAATTCAAGGAGGCTCTTAGGGTTTTAGATATGGGACTGATCATGGGGGGGATGCTTCTAAAGAAGGACTTGAAATCTGCTGTTGAGAAAGTATCGGAAAAGGTCAGGAACGTTAGGGCTTATGAAGAAAGCCATGCAGGTTTGGGGAAGTCCGATCATCGACTTGTTGATCACGAACTTAATGAGGCTGAGGTGCTCCAACTTCTACCTGTCAACTCCCTGTCTCGTAAAATTGTGGTGAAGAGGTCTGCTCTGTCACTGGAAAGTTTCTTAAAAGATTATTACCTGTCTGGTTCTCCAGTTATTATCAGTGATTGTATGGCTAACTGGCCTGCCAAGACAAAATGGAATAACTTGGATTACTTGAAAAGAGTTGCCGGTGACCGAACAGTTCCAGTTGAGGTTGGGAAGAACTATTTACGTGCAGAGAGGAAGAAAGAGTTAATTACATTTTCAGAGTTTCTTCAGCGAATAGATTCCCATGGCTGCTTAGGTGGTCCTACATATCTTGCTCAGCATCCATTATTTGATCAGATAAATGAGCTTCGAAAAGATATTTGTATTCCTGACTATTGTTTTGCTGGCGGAGGGGAGTTAAGATCTCTCAATGCTTGGTTTGGTCCAGCCGGGACAGTAACACCATTACACCATGATCCACACCACAACATACTAGCTCAGGTTGGTGGGAAGAAATATATAAGGCTCTATTCTTCATCTTTGTCTGAGGAACTTTGCCCTTACTCTGAAACCATGCATAGAAATTCTAGCCAGATTGATCTAGATGACATGGATGAAAGGATGTTTCCCGAGGTGCTCTCTAGCTACCAGCTTCTCAGTTAG 1143 0.4733 MSSSAAAVTTISGGDSPDHLETPILDRDSPCLLHSISEHGGYAYVSIAALAVAGDFRAAEAAREMAWEQLHSGPWHSVLPVWRDAYSMACLYAAKHHYSSGEFKEALRVLDMGLIMGGMLLKKDLKSAVEKVSEKVRNVRAYEESHAGLGKSDHRLVDHELNEAEVLQLLPVNSLSRKIVVKRSALSLESFLKDYYLSGSPVIISDCMANWPAKTKWNNLDYLKRVAGDRTVPVEVGKNYLRAERKKELITFSEFLQRIDSHGCLGGPTYLAQHPLFDQINELRKDICIPDYCFAGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVGGKKYIRLYSSSLSEELCPYSETMHRNSSQIDLDDMDERMFPEVLSSYQLLS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0115 380 MobiDBLite consensus disorder prediction 1 21 - -
Glsi04g0115 380 Gene3D Cupin 179 378 - -
Glsi04g0115 380 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 87 373 - -
Glsi04g0115 380 Pfam Cupin-like domain 190 372 IPR041667 -
Glsi04g0115 380 ProSiteProfiles JmjC domain profile. 263 380 IPR003347 -
Glsi04g0115 380 SUPERFAMILY Clavaminate synthase-like 184 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0115 Glsi-ChrGlsi04 888690 892435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0115 174 336 Acyl Lipid Metabolism Gene Families AT3G45880 27.717 4.14e-07 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0115 04 888690 892435 Glsi04g0115 04 888690 892435 ECH