Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0104 ATGACATTCACGGTCTACGATCTCCTCCTTAGTCTTTTGCTTGTTGTTAGATCAGTGACTTTCACTGAACCTGTTTCAGCCTTCTATGGAGGAAAGCTTAGCGGAGGAATTTGGAGACAGGGTGAAGCATTTAGATTACATTCAATGAGCCATGGATCTTCAGCAGAAATGGCTAGGTCGATGTTCTGCCTGGGCCTGGCTAAACCTTTAATTGCGTGGACGGAGATTACGCCACCGAACCATTCATTGTGTCTCACTGCCAATTACTTGCTAATGCAGCTGCGTGCTGTCAAAGTCTACAAGACTAAACATCTCAAAAAGAGCTTGACTGGGATAACTGTTGCATGTCACTGGATGGTGCCATTGTCCAATGCCAAAGTCGACCATCGTGCTGCGCCAAGAGCTATTTCGTTTATGGACCCAATGACCGCAGGAGACTATCCTGCTACTATGCGATCTATTGTAGGACACAGATTACCCAAATTCTCCGAAGAAGAATCCAAGATGCTGATTGGGTCCTTCGATTTTACCGGACTAAACTACTATACTGCTAATTATGCAGCCGACGCACCTCTCGAGTAA 582 0.457 MTFTVYDLLLSLLLVVRSVTFTEPVSAFYGGKLSGGIWRQGEAFRLHSMSHGSSAEMARSMFCLGLAKPLIAWTEITPPNHSLCLTANYLLMQLRAVKVYKTKHLKKSLTGITVACHWMVPLSNAKVDHRAAPRAISFMDPMTAGDYPATMRSIVGHRLPKFSEEESKMLIGSFDFTGLNYYTANYAADAPLE 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0104 193 SUPERFAMILY (Trans)glycosidases 82 191 IPR017853 -
Glsi04g0104 193 PANTHER GLYCOSYL HYDROLASE 19 189 IPR001360 GO:0004553|GO:0005975
Glsi04g0104 193 Pfam Glycosyl hydrolase family 1 86 190 IPR001360 GO:0004553|GO:0005975
Glsi04g0104 193 Gene3D Glycosidases 15 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0104 Glsi-ChrGlsi04 815468 816937 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0104 85 189 Glycoside Hydrolase AT2G44480 46.018 2.68e-27 103
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi04g0104 04 815468 816937 Glsi04g0104 04 815468 816937 ECH