Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3621 ATGATCAAGTGGGTACTGATGATAGCTTTAACTGTTTCCAGCTTCAGCTTCCCCAAGACTACGCTCAGGCCCTTTGATTTGCGATATATCAGAGGGATCTTGACGGTTCATCTCATTGCTGTCCTTTCGTGTGCATTACAGAAAATTGTGGCCTCATTCCTCAGAAGGGACTCTGCTTTAAATGGAAATTCAAATCTTGAAGATTCAAATGCAAATTTACATAGTATGAGTGCAGAAACAAACTTGTGCAGGAATGCATCCACTCATAATGGACAACTTCTCAGCACATCCTTTTGTAAGCTAACCATAGGATTAGATGCTCAAATTGACATTGGTTACAAAGGCATCAATACAGACAAGGCAACAACAGTAGCTAAATTAGATGCCATGAAAAAAGAGAGAGAATATAAACCTGAGACCAGAGAGGCGAAACGGACAGACACACACTTGCGTTCATCGAAGAGGGAGCAGGTAATAATGTCAAACTTGAGCATTTGGTTAGGACTGGGAGCATTAGCGCTGGTATTTGTATCATCGGCTTCTGCCGACGATGTTCTCGTGCTGACGGAGGACAACTTCGATAAAGAGGTTGGCCAAGATCGCGGCGCTCTCGTCGAGTTTTATGCTCCCTGGTGTGGACACTGTAAAAGGCTTGCCCCAGAGTATGAAAAACTTGGAACAAGTTTTAGAAAGGCCAAATCCATTTTGATTGGGAAGGTGGACTGTGATGAGCAAAAAAGTATCTGCAGCAAGTATGGTGTTTCTGGTTATCCCACGATTCAATGGTTTCCTAAGGGATCTCTAGAACCAAAGAAGTATGAAGGTGAACGGACTGCAGAAGCCCTTGCTGAGTTTGTGAACAAAGAAGAAGGTACCAATGTGAAGATAGCTTCTGTTCCATCCAGTGTGGTAGTTCTCACTTCAGATAACTTTGATGAGGTTGTCTTGGATGAAACAAAAGATGTTCTGGTTGAGTTCTATGCGCCATGGTGTGGTCATTGCAAAGCCCTTGCCCCTACTTATGAAAAGGCTGCTACAGCATTCAAATTGGAGGAAGATGTTGTAATAGCCAATATTGATGCTGAAAAATTCAAAGATTATGCTGAGAAGTATGGTGTTAGTGGCTATCCCACCCTCAAATTTTTTCCAAAGAGCAATAAAGCTGGTGAAGACTATGATGGTGGCCGAGATTTGGATGATTTTGTTACTTTCATCAATGAGAAATGTGGTACCAGCCGTGATGGGAAAGGACAGCTTACTTCTAAAGCTGGTATAGTAGCAAGTCTGGATGGCTTGGTGAAGGAATTTTTGAGTGCTGCTGGTGATGAGAAGAAATTGGTCTTTTCCCAGCTTGAGGAGGAAGTTAAGAAGCTTAAGGGTTCTTCTGCAAGATATGGCAATCACTATATAAAATTTGCTAAAAACTGTATGGAAAAAGGTGCAGACTATGCAACAAAGGAGATTCAACGTCTTGAGCGCATACTTGACAAGTCAATCAGCCCTGCAAAGGCAGATGAGCTAACTCTCAAGAAGAACATATTATCTACCTTTGCATGA 1557 0.422 MIKWVLMIALTVSSFSFPKTTLRPFDLRYIRGILTVHLIAVLSCALQKIVASFLRRDSALNGNSNLEDSNANLHSMSAETNLCRNASTHNGQLLSTSFCKLTIGLDAQIDIGYKGINTDKATTVAKLDAMKKEREYKPETREAKRTDTHLRSSKREQVIMSNLSIWLGLGALALVFVSSASADDVLVLTEDNFDKEVGQDRGALVEFYAPWCGHCKRLAPEYEKLGTSFRKAKSILIGKVDCDEQKSICSKYGVSGYPTIQWFPKGSLEPKKYEGERTAEALAEFVNKEEGTNVKIASVPSSVVVLTSDNFDEVVLDETKDVLVEFYAPWCGHCKALAPTYEKAATAFKLEEDVVIANIDAEKFKDYAEKYGVSGYPTLKFFPKSNKAGEDYDGGRDLDDFVTFINEKCGTSRDGKGQLTSKAGIVASLDGLVKEFLSAAGDEKKLVFSQLEEEVKKLKGSSARYGNHYIKFAKNCMEKGADYATKEIQRLERILDKSISPAKADELTLKKNILSTFA 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3621 518 ProSitePatterns Thioredoxin family active site. 323 341 IPR017937 -
Glsi02g3621 518 ProSiteProfiles Thioredoxin domain profile. 167 291 IPR013766 -
Glsi02g3621 518 Gene3D Glutaredoxin 177 290 - -
Glsi02g3621 518 Gene3D Glutaredoxin 291 425 - -
Glsi02g3621 518 NCBIfam protein disulfide-isomerase domain 188 289 IPR005788 GO:0003756
Glsi02g3621 518 NCBIfam protein disulfide-isomerase domain 306 408 IPR005788 GO:0003756
Glsi02g3621 518 SUPERFAMILY Thioredoxin-like 176 288 IPR036249 -
Glsi02g3621 518 PRINTS Thioredoxin family signature 330 339 - -
Glsi02g3621 518 PRINTS Thioredoxin family signature 322 330 - -
Glsi02g3621 518 PRINTS Thioredoxin family signature 372 383 - -
Glsi02g3621 518 SUPERFAMILY Thioredoxin-like 300 410 IPR036249 -
Glsi02g3621 518 CDD ERp29c 426 517 IPR011679 GO:0005783
Glsi02g3621 518 Pfam Thioredoxin 303 406 IPR013766 -
Glsi02g3621 518 Pfam Thioredoxin 185 287 IPR013766 -
Glsi02g3621 518 PANTHER PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED 277 505 - -
Glsi02g3621 518 ProSiteProfiles Thioredoxin domain profile. 293 410 IPR013766 -
Glsi02g3621 518 SUPERFAMILY ERP29 C domain-like 423 517 IPR036356 -
Glsi02g3621 518 FunFam Protein disulfide-isomerase A6 homolog 297 415 - -
Glsi02g3621 518 CDD PDI_a_ERp38 184 286 - -
Glsi02g3621 518 Gene3D - 426 518 IPR036356 -
Glsi02g3621 518 Pfam Endoplasmic reticulum protein ERp29, C-terminal domain 424 517 IPR011679 GO:0005783
Glsi02g3621 518 FunFam Protein disulfide-isomerase A6 homolog 178 296 - -
Glsi02g3621 518 CDD PDI_a_ERp38 302 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3621 Glsi-ChrGlsi02 83010804 83024089 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3621 02 83010804 83024089 Glsi02g3621 02 83010804 83024089 ECH