Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3607 ATGGGGTCTTTCGGAGCTGAAACTGCGAAGAAGAAAGCAATGTGGCTGTACCCAAAAGTTTTGGGTTATAATCCTTCTGAAAGATGGGGGCACTCTGCTTGTTTCTCTGAGGGGATTATGTTTGTCTTCGGGGGCTGTTGTGGGGGGCTTCATTTTAGCGATGTTCTCACTCTGGACCTTGACAAAATGACGTGGAACAAACTTGGAACCACAGGGGAAGGGCCTGGCCCTAGAGATAGCCATAGTGCTGTTCTGGTAGGGCGTAAAATGATAGTTTTTGGCGGTACGAATGGCTTCAAGAAGGTGAATGATATTCATATTCTGGATCTTGTCACCAAAGTGTGGGTTCGTCCTGAATGTAAAGGAAACCCTCCTCCTCCCCGTGAAAGTCACAGTGCCACTCTGTTTGGCGATGAAAGATTAGTGATTTTTGGTGGTAGTGGGGAAGGGGATGCAAACTACCTAAATGATCTGCACGTTCTCGATCTTCGAACCATGAGATGGACTTCTCCAGAGGTGAAAGGTGATTTGCCTGTCCCTAGAGACAGTCACAGTACTCTTGCAATTGGGAACAAGCTATTAGTATATGGTGGAGACTCTGGCGATCAGTATCATGGCACTGTCAACTTGCTTGATTTGGAAACAATGACTTGGTCAAGGGTCTATATCATTGGAGGGGTTGGAGATAAACGTTACTATAATGACGTTTGGGTGTTTGATGTCTGCACTTGCTCATGGACTCAACTTGAAATACGGAGTCACCAACCACAAGGACGGTTTTCTCATACAGCTGTTGTTGCAGACATGGACATTGTTATATATGGAGGGTGTGGGGAAGATGAGCGTCCTCTTGATCAAGTGTTAGTATTGCAGCTCGAAGTAGAGCATCTAAATAGACGTTACAGCATTTCAAAGTGCAAATTTTTTGGAACTTATTGGAACCTAGAAAAGAAGACTCCTCCAAGAGAAGCAGACAGCGACCTGAAAACTATACTCATGCGTCATCACGCGGAAACTTTCGGAAGGGGAGCTTATGAATTTGTATCAGAGAAAAATCACCCTCTTCCCTTTGAATCAGGTGGGTTAAGACCTCAAGACACTTCCTTAAGCACAATACACTGTTGGACTCAATCTTTGATTGACTTAAAATTGCGATTCTGTTTAGATACTTCACAACAGAAGAGGAGGAGAATTGGTGCTTCCAAAGTGTGGAATGTTGAATCAGAACAGGAAGACCATTCCCTTTCATTGTCCCAGCATTCATCTCCAACTCAATCTGATCAAGAACAGACCCCTGCTCATCAAAAAGCCAATGCTTCTATCACGGACTCCCAGCGATTTTTTCTGTTCAAACACTTGAATCAAATTCCCAGAAATTGCCAATGTGAGAGGGGCTCAATTAACCAGAAAGTGTTGAAGAACACCAACCAGATTAGTCCACAGGATCTTCACTTTCTGGAACATCAGAACCAACGAAAACAAGAACAGTATCTTCATGTTTATGGGGCAGAGCACAAGTCCATTGGACGAGGACCCATCCAACACCTGATGGGTGCTGAAGTCCGAGGGAAAATTGATGGGGCATTTGACTCAGGTTTGCTGATGACTGCAACTGTGAATGGAAAACTTTTCCGAGGAGTTTTATTTGCACCAGGAGCGGGAGTAGTGTCAAGGGGGACCAGCGTTGAACCTAGTTCTTCTTTATATAGTACATCTCCCTCCAATCAACCATTTCTGAACGCAAATCATGAGGAAAATTGGAGGGCTTCCCAGCAGGTAACTGGTTGTTCCCGTGGAGAGTCGTGTCAGTTGGCTCAACCATTTCCAATCATAAGAGGAACTCCACCATCTCTATCCAAAGAGCAGAAAATCAGGAGCGATCTTAAAGGGTCAGCTTCTCGCTACTATTACGTAACAAAGAACCGTAGTACAGTATCAGTATTGGCAGAGATAGAGAGTGGTGGTGGGCCCTCACACAACAGAAAATTCCCCCGTGCTCCCCGCGCGACGCTGTCGTTGTGTCTTGTAAATTGTAATGTCCGCAATCATGTTGACAAGACCACTGCTGCTCCTTTTTACAGAGGTTGCTTCCGTCATCCACCACCCTCTCTCTCTGGGCTCCACCTCTCTGTCTCTCTCGTGAATCGGGACGGACCATCTACCTCCTGCGCCTCACGCTGCTTTTCTGTTGGATCACTAGTTTTCCTGGACCCATTAAGTCATGAAGTTGGATCACCAGGCTTGTCTGCCCGTTTCGCTAGAGAAGAATTTGAGAAACCAGATATATGGGCTCAGCTATGCATCCAAACAATGGTTGAATTAGCCAAGGAAAGCACAACAATGCACGAGATGACACTGGGCTACATAGCAAGGGTTAGCAATGATAGTTTTGGCCAGCCCGGTCTAATTCATGGAGGATTCAGATATAGCCAAAGGGGTGGGTTCAGAATGAATGCATTCTTTTCTCCTTATTTGGCTGCATACCACAATTTTACAACGGATGGGGCACGGCTTTCTACTACTAAATTAGTTCTTTTTGTTTGGGGATTGGCTAACCATAGAAATGATAAGCTTCTATCTCTCTCTTTACTTGAAAAGCTCTGGAGAGGCAAAGATGACATCAAGACAACAAATACTGGGACAACTGTTCATGGTGGTTGCAAGGATAGGGATATTGTAGTTGAAGACTGGAAGCAGGCTAAACAACCCATACTATGTTTTAAGGCGCTAGAGGTAGATGGTCAGGTGGCAGGAACAGCTGTCTCCGTAAAGCGAGAGCCCAAGAAAGTGCTTTGCCAAAAGACCCATGGCTCACTGCTTCCTGCTAGCTCCTTGACAATTTCCTTAAGGCTGCTGGGTGTTAGATGA 2868 0.4533 MGSFGAETAKKKAMWLYPKVLGYNPSERWGHSACFSEGIMFVFGGCCGGLHFSDVLTLDLDKMTWNKLGTTGEGPGPRDSHSAVLVGRKMIVFGGTNGFKKVNDIHILDLVTKVWVRPECKGNPPPPRESHSATLFGDERLVIFGGSGEGDANYLNDLHVLDLRTMRWTSPEVKGDLPVPRDSHSTLAIGNKLLVYGGDSGDQYHGTVNLLDLETMTWSRVYIIGGVGDKRYYNDVWVFDVCTCSWTQLEIRSHQPQGRFSHTAVVADMDIVIYGGCGEDERPLDQVLVLQLEVEHLNRRYSISKCKFFGTYWNLEKKTPPREADSDLKTILMRHHAETFGRGAYEFVSEKNHPLPFESGGLRPQDTSLSTIHCWTQSLIDLKLRFCLDTSQQKRRRIGASKVWNVESEQEDHSLSLSQHSSPTQSDQEQTPAHQKANASITDSQRFFLFKHLNQIPRNCQCERGSINQKVLKNTNQISPQDLHFLEHQNQRKQEQYLHVYGAEHKSIGRGPIQHLMGAEVRGKIDGAFDSGLLMTATVNGKLFRGVLFAPGAGVVSRGTSVEPSSSLYSTSPSNQPFLNANHEENWRASQQVTGCSRGESCQLAQPFPIIRGTPPSLSKEQKIRSDLKGSASRYYYVTKNRSTVSVLAEIESGGGPSHNRKFPRAPRATLSLCLVNCNVRNHVDKTTAAPFYRGCFRHPPPSLSGLHLSVSLVNRDGPSTSCASRCFSVGSLVFLDPLSHEVGSPGLSARFAREEFEKPDIWAQLCIQTMVELAKESTTMHEMTLGYIARVSNDSFGQPGLIHGGFRYSQRGGFRMNAFFSPYLAAYHNFTTDGARLSTTKLVLFVWGLANHRNDKLLSLSLLEKLWRGKDDIKTTNTGTTVHGGCKDRDIVVEDWKQAKQPILCFKALEVDGQVAGTAVSVKREPKKVLCQKTHGSLLPASSLTISLRLLGVR 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3607 955 MobiDBLite consensus disorder prediction 560 580 - -
Glsi02g3607 955 Gene3D - 10 220 IPR015915 GO:0005515
Glsi02g3607 955 SUPERFAMILY Kelch motif 20 221 IPR015915 GO:0005515
Glsi02g3607 955 Gene3D - 221 304 IPR015915 GO:0005515
Glsi02g3607 955 MobiDBLite consensus disorder prediction 410 438 - -
Glsi02g3607 955 SUPERFAMILY Kelch motif 220 290 IPR015915 GO:0005515
Glsi02g3607 955 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 220 570 - -
Glsi02g3607 955 Pfam Galactose oxidase, central domain 220 249 - -
Glsi02g3607 955 MobiDBLite consensus disorder prediction 409 438 - -
Glsi02g3607 955 Pfam Galactose oxidase, central domain 40 85 - -
Glsi02g3607 955 Pfam Galactose oxidase, central domain 87 136 - -
Glsi02g3607 955 Pfam Galactose oxidase, central domain 139 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3607 Glsi-ChrGlsi02 82904464 82916469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3607 115 299 Acyl Lipid Metabolism Gene Families AT3G05420 30.455 2.74e-16 81.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3607 02 82904464 82916469 Glsi02g3607 02 82904464 82916469 ECH