Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3604 ATGGCCTCGAAAACAGTCCACTCCTCTCTTTCGCGTCCTACATCGACCTTCTTATTCTCTTATAGTCTGAAAGGACTGAAGCCTATTTCACTTCCACCTCAATTCTTCCAATGCCGATCGAAACGCTTCGTTTTGTCGCGACGATTGGTGGCGAAAGCTTGTGTGAAGGTGGAAGAGAAGAACGTTGCGGAAAATTCTTCAGCAGAAGAGTGGGGGAAGGTTTCCGCAGTGTTGTTTGACATGGACGGTGTTCTCTGCAACAGCGAAGAACCTTCTAGAAGAGCAGCCGTCGATGTATTCGCGGAGATGGGCGTCCAAGTCACTGTCGAGGATTTTGTGCCATTCATGGGGACTGGTGAAGCGAAATTTTTGGGAGGTGTTGCCTCTGTTAAGGGATTTAAAGGATTTGACCCTGAAGCTGCAAAACAGAGGTTCTTTGAAATTTATTTAGATAAGTATGCAAAACCAGATTCTGGAATAGGATTCCCCGGTGCCCTTGAACTAATATCTCAGTGTAAAAGCAAAGGCCTTAAAGTTGCTGTTGCATCTAGTGCTGATCGTATAAAGGTCGATGCTAATCTAGCTGCTGCTGCTTTACCATTGTCAATGTTCGATGCTATTGTGTCTGCAGATGCTTTTGAGAATTTGAAACCTGCTCCGGATATTTTCTTAGCTGCATCAAGAATATTGAATGTGCCCCCAAGTGAGTGTATTGTTATAGAAGATGCATTAGCTGGAGTGCAAGCTGCCAAAGCTGCACAGATGAGATGTATAGCTGTCAGGACCACTTTATCAGATGAGGCATTGAAATCTGCTGGCCCAACACTTATCCGAGATGATATAGGAAGTGTTTCACTTGATGATATTCTAAGTGGTGGCTCTGTTGGCTATAATAATAACATGCAGGGGTCACAATCTCTTAATAATGCACAATCTTCATCTGGAATGCTTGCTGGAAATTCAGATAGTGTACTTACCAAAACTACCAGTAGCACTAAGAGGGGAAATTTTCCAACTGGATGGTTGCAGGGTTCTCGGCGAGATATACTGAGATTTGGAAGTCTGGGTATTGCCATCTCTTGCCTCATTTTCACCTTAAATAACTGGAAGGCAATGCAATATGCTTCCCCTAAAGCCATTTGGAATCTGTTGTTTGGTGTAAACCAACAATCTTTGGAGCAAAAAGAAGGCAAATCAAGATATGATAGGATCCAGCAATTTATGAACTACATAACTGATGTGGAAGGCAGGGGAAATGCTCAGATTGTTCCAGAGTTTCCATCTAAGCTTGATTGGCTGAATACATCTCCCCTTCAGTTTGGCAGGGATCTGAGGGGAAAAGTGGTTTTGTTGGATTTCTGGACATATTGTTGTATCAATTGTATGCATGTGTTGCCAGATCTGGACTATTTAGAGAAAAAATACAAAAATATGCCGTTCATTGTTGTGGGTGTCCATTCTGCAAAGTTTGATAATGAGAAAGATTCTGAAGCCATTCGCAATGCAGTGCTACGCTATGATATCACTCACCCAGTTGTCAATGATGGAGATATGTATCTTTGGCGGACGCTGGGCATAAGTTCATGGCCAACATTTGCTATTGTAGGGCCTAATGGTAAGCTCCTGGCACAAATTTCAGGAGAAGGTCACAGGAAGGATCTTGATGATTTTGTGGAGGCAGCTCTCTTGTTTTACGGAAAAGAGAACATGTTGGACAATACACCAATTGCATTGAATTTGGAGAAAGATAATGATCCTCGTCTACTGAAATCTCCATTGAAGTTTCCTGGAAAGCTAGCAATTGATGTCCTTAACAACAGGCTTTTCATTGCAGACAGCAACCATAACCGTATAGTGGTAACTGACCTAGATGGGAATTTTATTGTACAAATTGGGAGCAGTGGGGAGGAAGGTTTGCAGGATGGTTCATTTGATGATGCCACCTTTAACCACCCTCAGGGCCTTGCTTATAATACAAAGAAAAATATTCTTTATGTTGCAGACACTGAAAACCATGCTTTGAGAGAAATTGATTTTGTTAATGAGAAAGTGCGTACTCTTGCTGGAAATGGGACCAAAGGTTCTGACTATACTGGAGGAGGGAAAGGACGCACTCAGCTCCTCAATTCTCCTTGGGATGTCTGCTTTCATCCAGTGGAACAAAAAGTTTATATTGCCATGGCTGGCCAACATCAGATCTGGGAGCACAATATAGTGGATGGAATTACTAGAGCATTTAGTGGTGATGGTTATGAGAGGAATTTAAATGGATCAAGCTCTACAAGCACATCATTTGCCCAGCCCTCTGGCATTTCATTGTCTCAAGATCTAATGGAGGTCTACATTGCCGATAGTGAGAGTAGTTCAATTCGAGCTGTTGATCTGAAAACTGGAGGATCACGGTTGCTAGTTGGTGGTGACCCAATCTTCCCAGATAATTTGTTCAAGTTTGGTGATCGTGATGGAATAGGCTCTGAAGTACTTCTTCAACATCCGCTGGCAGTTTTGTGCACAAAGGATGGTCAAATTTATATCACAGATAGCTACAATCACAAGATCAAGAAGTTAGATCCAACTAGTAAAAGAGTTAGCACCATTGCAGGGACTGGGAAAGCAGGTTTTAGGGATGGAACAGCTGTAGCCGCTCAGCTTTCCGAACCATCCGGAATTGTTGAAGGGAATACTGGGAGACTATTCATAGCTGATACAAACAACAGCTTAATCCGATATCTGGATTTAAACAATGAAGGGTTTGAACTCCATACTTTAGAACTTAAAGGCGTTCAGCCTCCCACACCAAAATCCAAATCTTTTAAACGTCTAAGGAGACGGTCATCAGCGGACACAGTGACCATCATCACTGGTGGTGTTACATCAAATGAAGGAAACTTGTCTATCAAAATATCATTACCGAATGAGTACCATTTCTCAAAGGAAGCACGTAGTAGATTTAGTGTTGATATCGAACCAGAAGATACCGTGGATATTGATCCCCAGGATGGATTTCTTAGTGATGGATCTGCAACACTTCATTTTAAAAGATCATCTACCTCAGCTTCAATGGGAAGAATTAACTGTAAGATTTACTTTTGCAAGGAAGATGAGGTTTGTTTGTACCAATCCTTACTGTTTGAGGTCCCCTTCCAAGAGGGAGTTGCTAACCCTACCCCAGCAGACGTCACACTTGCGCATTTGGTGAAACCCAAAGCTTCAGCCAATAGCTTACCGCTGCCCGTTGCCCCGTGA 3246 0.4258 MASKTVHSSLSRPTSTFLFSYSLKGLKPISLPPQFFQCRSKRFVLSRRLVAKACVKVEEKNVAENSSAEEWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVQVTVEDFVPFMGTGEAKFLGGVASVKGFKGFDPEAAKQRFFEIYLDKYAKPDSGIGFPGALELISQCKSKGLKVAVASSADRIKVDANLAAAALPLSMFDAIVSADAFENLKPAPDIFLAASRILNVPPSECIVIEDALAGVQAAKAAQMRCIAVRTTLSDEALKSAGPTLIRDDIGSVSLDDILSGGSVGYNNNMQGSQSLNNAQSSSGMLAGNSDSVLTKTTSSTKRGNFPTGWLQGSRRDILRFGSLGIAISCLIFTLNNWKAMQYASPKAIWNLLFGVNQQSLEQKEGKSRYDRIQQFMNYITDVEGRGNAQIVPEFPSKLDWLNTSPLQFGRDLRGKVVLLDFWTYCCINCMHVLPDLDYLEKKYKNMPFIVVGVHSAKFDNEKDSEAIRNAVLRYDITHPVVNDGDMYLWRTLGISSWPTFAIVGPNGKLLAQISGEGHRKDLDDFVEAALLFYGKENMLDNTPIALNLEKDNDPRLLKSPLKFPGKLAIDVLNNRLFIADSNHNRIVVTDLDGNFIVQIGSSGEEGLQDGSFDDATFNHPQGLAYNTKKNILYVADTENHALREIDFVNEKVRTLAGNGTKGSDYTGGGKGRTQLLNSPWDVCFHPVEQKVYIAMAGQHQIWEHNIVDGITRAFSGDGYERNLNGSSSTSTSFAQPSGISLSQDLMEVYIADSESSSIRAVDLKTGGSRLLVGGDPIFPDNLFKFGDRDGIGSEVLLQHPLAVLCTKDGQIYITDSYNHKIKKLDPTSKRVSTIAGTGKAGFRDGTAVAAQLSEPSGIVEGNTGRLFIADTNNSLIRYLDLNNEGFELHTLELKGVQPPTPKSKSFKRLRRRSSADTVTIITGGVTSNEGNLSIKISLPNEYHFSKEARSRFSVDIEPEDTVDIDPQDGFLSDGSATLHFKRSSTSASMGRINCKIYFCKEDEVCLYQSLLFEVPFQEGVANPTPADVTLAHLVKPKASANSLPLPVAP 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3604 1081 SUPERFAMILY Thioredoxin-like 421 559 IPR036249 -
Glsi02g3604 1081 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 172 185 IPR006439 -
Glsi02g3604 1081 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 74 85 IPR006439 -
Glsi02g3604 1081 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 204 220 IPR006439 -
Glsi02g3604 1081 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 222 242 IPR006439 -
Glsi02g3604 1081 PANTHER NHL REPEAT-CONTAINING PROTEIN 2 99 1077 - -
Glsi02g3604 1081 SUPERFAMILY HAD-like 74 283 IPR036412 -
Glsi02g3604 1081 Pfam NHL repeat 649 674 IPR001258 GO:0005515
Glsi02g3604 1081 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 73 282 - -
Glsi02g3604 1081 Gene3D Glutaredoxin 392 564 - -
Glsi02g3604 1081 FunFam NHL repeat-containing protein 2 578 734 - -
Glsi02g3604 1081 FunFam NHL repeat-containing protein 2 401 565 - -
Glsi02g3604 1081 SMART LY_2 820 863 IPR000033 -
Glsi02g3604 1081 SMART LY_2 586 628 IPR000033 -
Glsi02g3604 1081 Gene3D - 569 735 IPR011042 -
Glsi02g3604 1081 Gene3D - 813 912 IPR011042 -
Glsi02g3604 1081 Pfam Haloacid dehalogenase-like hydrolase 77 260 IPR041492 -
Glsi02g3604 1081 ProSiteProfiles Thioredoxin domain profile. 398 563 IPR013766 -
Glsi02g3604 1081 ProSiteProfiles NHL repeat profile. 829 859 IPR001258 GO:0005515
Glsi02g3604 1081 CDD NHL-2_like 631 972 IPR045302 -
Glsi02g3604 1081 SUPERFAMILY NHL repeat 587 917 - -
Glsi02g3604 1081 FunFam Chloroplast protein HCF243 809 913 - -
Glsi02g3604 1081 Pfam Thioredoxin-like 446 540 IPR012336 -
Glsi02g3604 1081 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 73 282 - -
Glsi02g3604 1081 Gene3D Putative phosphatase; domain 2 87 158 IPR023198 -
Glsi02g3604 1081 Gene3D - 76 272 IPR023214 -
Glsi02g3604 1081 CDD HAD_BPGM-like 76 262 - -
Glsi02g3604 1081 NCBIfam HAD-IA family hydrolase 198 260 IPR006439 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3604 Glsi-ChrGlsi02 82866938 82894505 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3604 02 82866938 82894505 Glsi02g3604 02 82866938 82894505 ECH