Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3590 ATGGCGCCTGATATCACCACCGCTGCTGCCAACGCCACCGCCACCCAAGCCAAGGCTGCCGGAAGACTCGGCCGTGCCTACGTTACTTTCCTGGCCGGTGATGGTGACTACGTGAAGGGCGTGGTGGGCTTGGCCAAAGGTCTTAGGAAGGCGAAGAGCATCTACCCGCTGGTGGTTGCAGTTTTGCCCGATGTTCCTGAGGACCACCGGAAGATTCTGACCTCGCAAGGTTGCATTGTGAAAGAGATAAAGCCGGTGTACCCGCCGGAGAACCAAACTCAGTTCGCCATGGCCTATTACGTCATCAATTACTCCAAGCTTCGTATTTGGGAGTTCGTGGAGTACAGCAAGATGATATACCTAGACGGTGACATCCAAGTTTTTGGCAACATCGACCACCTTTTCGATCTGCCCAACGATTACTTCTATGCGGTGATGGACTGTTTCTGCGAGAAAACATGGAGCCACAGCCCACAGTACCAGATCGGTTATTGCCAGCAGTGCCCTGATAAGGTTCAGTGGCCCTCTCACTTGGGACCCAAGCCTCCTCTCTATTTCAACGCTGGCATGTTTGTTTATGAGCCTAATCTTTCCACTTACGACGACCTCCTCAAAACCCTCCAAGTCACCAAGCCTACCTCCTTTGCAGAGCAGGACTTTCTGAACATGTACTTTAAGGACAAATACAGGCCCATATCTAATATGTACAACCTTGTTCTGGCCATGCTGTGGCGCCACCCTGAGAATGTTCAGCTTGACAAAGTCAAAGTGGTTCATTACTGTGCTGCTGGGTCTAAACCTTGGAGGTACACTGGCAAGGAAGTAAACATGGACAGGGAAGACATCAAGATGCTGGTGAAGAAATGGTGGGAGATTTATGAAGATGAGACATTGGACTATGAAAACCCTGTGAATTTGGAACGTATAAAGGAGGCGCTAACGGAGGCTGGCGGTCTTCAGTATGTTCCAGCCCCATCCGCCGCCTAG 987 0.5096 MAPDITTAAANATATQAKAAGRLGRAYVTFLAGDGDYVKGVVGLAKGLRKAKSIYPLVVAVLPDVPEDHRKILTSQGCIVKEIKPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFGNIDHLFDLPNDYFYAVMDCFCEKTWSHSPQYQIGYCQQCPDKVQWPSHLGPKPPLYFNAGMFVYEPNLSTYDDLLKTLQVTKPTSFAEQDFLNMYFKDKYRPISNMYNLVLAMLWRHPENVQLDKVKVVHYCAAGSKPWRYTGKEVNMDREDIKMLVKKWWEIYEDETLDYENPVNLERIKEALTEAGGLQYVPAPSAA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3590 328 PANTHER GLYCOGENIN SUBFAMILY MEMBER 19 295 - -
Glsi02g3590 328 FunFam Hexosyltransferase 23 301 - -
Glsi02g3590 328 Pfam Glycosyl transferase family 8 29 271 IPR002495 GO:0016757
Glsi02g3590 328 CDD GT8_Glycogenin 25 295 - -
Glsi02g3590 328 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 24 301 IPR029044 -
Glsi02g3590 328 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 299 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3590 Glsi-ChrGlsi02 82794819 82796361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3590 1 328 Glycosyltransferase AT1G56600 77.515 0.0 538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3590 02 82794819 82796361 Glsi11g0311 11 2034312 2035601 CCT
Glsi02g3590 02 82794819 82796361 Glsi02g3590 02 82794819 82796361 ECH