Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3576 ATGGGGTTGCAGCAAAAACCAAAGGACTCGGAGACGCTCTTAATTAACGACTCCAAGTTTCTGTTTCAGGAGATTATTAGACTTTTCATGGTCAACTCGGGATTTGTAATCATGGATACCTTCCTGTTCACTTCAGAATCAGTGAATGAGGGTCATCCTGACAAGCTGTGTGATCAGATTTCTGACGCAGTGCTTGATGCCTGCCTGGAGCAAGATCCCGAGAGCAAGGTTGCCTGTGAGACCTGCTCTAAGACTAACTTGGTCATGGTGTTTGGAGAGATCACCACTAAAGCCAATGTAGACTACGAGAAGATTGTCCGTGACACATGCCGTTCAATAGGGTTTGTTTCCAATGATGTTGGCCTCGATGCTGACAATTGCAAGGTGTTAGTCTGCATTGAGCAGCAAAGCCCTGATATTGCCCAGGGAGTTCACGGCCATCTCACCAAGCGACCTGAGGAGATAGGTGCTGGTGATCAGGGTCACATGTTTGGCTATGCCACAGATGAAACACCTGAGCTAATGCCCCTCAGCCATGTCCTTGCAACTAAGCTCGGTGCCCGCCTCACCGAAGTACGCAAGAATGGGACATGCCCTTGGTTGAGACCTGATGGAAAAACCCAAGTCACTGTGGAATATTATGATGACCGTGGGGCTATGGTTCCAGTCCGTGTCCACACTGTTCTCATTTCTACTCAGCATGATGAAACTGTTACTAACGATGAGATTGCTGCTGACCTCAAAGAGCATGTTATTAAGCCTGTTATTCCTGAGAAGTACTTAGATGAGAAGACCATCTTCCATCTCAATCCATCTGGCCGTTTTGTCATTGGTGGACCTCATGGCGATGCAGGTCTTACTGGGCGCAAAATCATAGTTGACACTTATGGTGGTTGGGGAGCCCATGGGGGTGGAGCTTTCTCTGGGAAAGACCCTACCAAAGTAGACAGGAGCGGAGCCTATATTGCTAGGCAGGCTGCAAAGAGTATTGTGGCCAGTAGACTTGCTAGAAGGTGCATTGTGCAAATCTCATATGCAATTGGTATTCCTGATCCATTGTCAGTGTTTGTTGACACTTACGGCACTGGAAAGATTCCAGACAAGGAGATTCTGAAGATTGTGAAGGAGAACTTTGATTTCAAGCCTGGAATGATCTCCATCAATTTGGATCTTAAGAGGGGTGGAAATGGCAGGTTCTTGAAAACTGCTGCTTATGGCCACTTTGGAAGAGACGGCCCTGACTTCACATGGGAGGCGGCGAAGCCTCTAAAGTGGGAGAATCCTCTAGACTAA 1293 0.4756 MGLQQKPKDSETLLINDSKFLFQEIIRLFMVNSGFVIMDTFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCSKTNLVMVFGEITTKANVDYEKIVRDTCRSIGFVSNDVGLDADNCKVLVCIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYDDRGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVASRLARRCIVQISYAIGIPDPLSVFVDTYGTGKIPDKEILKIVKENFDFKPGMISINLDLKRGGNGRFLKTAAYGHFGRDGPDFTWEAAKPLKWENPLD 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3576 430 Gene3D - 41 279 - -
Glsi02g3576 430 FunFam S-adenosylmethionine synthase 299 418 - -
Glsi02g3576 430 Pfam S-adenosylmethionine synthetase, central domain 154 275 IPR022629 GO:0004478|GO:0006556
Glsi02g3576 430 Gene3D - 154 418 - -
Glsi02g3576 430 ProSitePatterns S-adenosylmethionine synthase signature 1. 156 166 IPR022631 GO:0004478|GO:0006556
Glsi02g3576 430 ProSitePatterns S-adenosylmethionine synthase signature 2. 303 311 IPR022631 GO:0004478|GO:0006556
Glsi02g3576 430 Gene3D - 48 316 - -
Glsi02g3576 430 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 38 426 IPR002133 GO:0004478|GO:0005524|GO:0006556
Glsi02g3576 430 Hamap S-adenosylmethionine synthase [metK]. 39 430 IPR002133 GO:0004478|GO:0005524|GO:0006556
Glsi02g3576 430 FunFam S-adenosylmethionine synthase 171 278 - -
Glsi02g3576 430 PIRSF MAT 35 427 IPR002133 GO:0004478|GO:0005524|GO:0006556
Glsi02g3576 430 NCBIfam methionine adenosyltransferase 42 423 IPR002133 GO:0004478|GO:0005524|GO:0006556
Glsi02g3576 430 Pfam S-adenosylmethionine synthetase, N-terminal domain 41 138 IPR022628 GO:0004478|GO:0006556
Glsi02g3576 430 SUPERFAMILY S-adenosylmethionine synthetase 277 425 IPR022636 GO:0004478|GO:0006556
Glsi02g3576 430 Pfam S-adenosylmethionine synthetase, C-terminal domain 277 418 IPR022630 GO:0004478|GO:0006556
Glsi02g3576 430 CDD S-AdoMet_synt 42 418 - -
Glsi02g3576 430 FunFam S-adenosylmethionine synthase 48 163 - -
Glsi02g3576 430 SUPERFAMILY S-adenosylmethionine synthetase 152 276 IPR022636 GO:0004478|GO:0006556
Glsi02g3576 430 SUPERFAMILY S-adenosylmethionine synthetase 40 146 IPR022636 GO:0004478|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3576 Glsi-ChrGlsi02 82738442 82741643 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3576 02 82738442 82741643 Glsi11g0382 11 2461189 2462220 ECH
Glsi02g3576 02 82738442 82741643 Glsi02g3576 02 82738442 82741643 ECH