Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3549 ATGCCCACGTGTTGTCGTCCTCGGGTGAAGTCTCGAGAGTTAGAACTTCAAAAACAACACTGGCATTGTTTTAAATTGCCAATCTGGTTTGCCGAAGAGGCCGAGAAAAAAGAGAGACAGAGCAATATAGATAGGCTGTGGCAAGACTCCAATCTCCATATCTCGAGAATGGCAGGCAAAGAGGCAAAGGAAGAAAACAAGCCCCTAGCCCAATGGAAGAAACAAAATGGTGGATTCAGAGCTTCCATGTTTATATTCGTCTTGTCAGCATTGGACAATATGGGTTCTGTGGCGAACATGGTGAGCTTAGTCCTATACTTTTATGGGGTCATGCACTTTGATCTCTCCAGCTCTGCCAACACTCTCACAAACTTTATGGGTTCGAGTTTCTTGCTCTCCCTTGTTGGTGGCTTCATCTCGGATACTTACTTAAACAGGCTCACCACATGCCTGCTTTTTGGGTTCCTCGAAGTTCTGGCTTTAGTACTGGTCACGGTTCAAGCTGCTTCAGATCATTTACACCCAGATGCCTGTGGCAAGTCCAGCTGTGTGAAAGGTGGTATCGCGGTCATGTTTTACACATCACTATGTTTGTTGGCATTGGGTACAGGAGGAGTTAGAGGATCTATGACTGCATTTGGGGCTGACCAATTTGATGGAAAGGATCCAATTGAAGCAAAAGCTCTAGCAAGTTTTTTCAATTGGCTTTTGCTTAGCTCGACTCTGGGAGGGGTTGTAGGAGTTACTGCTGTTGTGTGGGTTAGCACCCAGAGGGCTTGGCATTGGGGATTTTTCATAATAACCGTGGCTTCTTTTGTTGGCTTTGTGACCCTTGCTCTTGGCAAGCCATTCTACCGCATCAGAACTCCAGGAGATAGCCCCATTGTCAGGATTTTTCAGGTTATTGTTGTGGCGTTTAAAAACCGAAAGCTACCATTGCCTGAGCCTCATCAAGAACTATATGAGATCAGTGATGGAGAAACTACCGTAGAGAAGATTGCACACACGAAACAGATGAGGTTTCTAGATAAAGCGGCCATTCTTCAAGAAGACTCAAAACCCCAACCATGGAAGGTGTGCACAGTGACACAAGTTGAAGAAGTCAAGATCCTCACCAGAATGTTACCGATATTAGCCAGTACCATCATAATGAACACTTGTTTAGCACAACTTCAAACATTTTCAGTCCAGCAAGGGAATGTTATGAACCTGAAACTCGGTTCTCTTACAGTGCCTGCACCTTCCATTCCTGTTATCCCCCTACTTTTCATGTGCATCCTCATTCCCGTCTATGAATTCTTCTTTGTCCCATTCGCTCGAAAGATCACTCATTACCCTTCAGGCATTACACAACTTCAACGAGTTGGCATGGGTCTGGTACTGTCTATCATTTCAATGGCAGTAGCTGGGATTGTGGAAGTGAAAAGAAGGAACCAAGGCAGAAAAGACCCACTTCACCCCATAAGTTTATTTTGGCTCTCTTTCCAATATGGTTTATTTGGAATTGCAGACATGTTTACCCTTGTAGGACTGTTGGAGTTTTTTTACAGGGAATCGCCTGCAAGCATGAAATCACTGTCAACTTCTTTCACATGGTTATCTATGTCGCTGGGTTACTTCTTAAGTACTGTCTTTGTCAATGTCATAAATGCTGTAACAAAAAAGATAACTCCAAGCAAACAAGGATGGTTGCATGGGTTCGACTTAAATCAGAGCAACCTGAACCTGTTCTATTGGTTCTTAGCGATTCTAAGCTGCCTTAATTTTTTGAACTACCTTTACTGGGCCTCCTGGTACAAGTACAAATCTGAAGACCGCAATTCAAAGCCAAATTTGAAGGCTCTGGCTGAAGCGCCTCTGAAAAGGGTCGATAGCACCCAAGAAAAGGAAGCCAAGATTAATGAAAGCAGCCAAACCAGTGAAGCCAAGACTGAGGGACCCTCTTCCTCTGATGAAACAGAAAAAGAAGCTAAATTATGA 1980 0.4394 MPTCCRPRVKSRELELQKQHWHCFKLPIWFAEEAEKKERQSNIDRLWQDSNLHISRMAGKEAKEENKPLAQWKKQNGGFRASMFIFVLSALDNMGSVANMVSLVLYFYGVMHFDLSSSANTLTNFMGSSFLLSLVGGFISDTYLNRLTTCLLFGFLEVLALVLVTVQAASDHLHPDACGKSSCVKGGIAVMFYTSLCLLALGTGGVRGSMTAFGADQFDGKDPIEAKALASFFNWLLLSSTLGGVVGVTAVVWVSTQRAWHWGFFIITVASFVGFVTLALGKPFYRIRTPGDSPIVRIFQVIVVAFKNRKLPLPEPHQELYEISDGETTVEKIAHTKQMRFLDKAAILQEDSKPQPWKVCTVTQVEEVKILTRMLPILASTIIMNTCLAQLQTFSVQQGNVMNLKLGSLTVPAPSIPVIPLLFMCILIPVYEFFFVPFARKITHYPSGITQLQRVGMGLVLSIISMAVAGIVEVKRRNQGRKDPLHPISLFWLSFQYGLFGIADMFTLVGLLEFFYRESPASMKSLSTSFTWLSMSLGYFLSTVFVNVINAVTKKITPSKQGWLHGFDLNQSNLNLFYWFLAILSCLNFLNYLYWASWYKYKSEDRNSKPNLKALAEAPLKRVDSTQEKEAKINESSQTSEAKTEGPSSSDETEKEAKL 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3549 659 MobiDBLite consensus disorder prediction 619 659 - -
Glsi02g3549 659 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 77 601 - -
Glsi02g3549 659 SUPERFAMILY MFS general substrate transporter 78 605 IPR036259 -
Glsi02g3549 659 Pfam POT family 149 562 IPR000109 GO:0016020|GO:0022857|GO:0055085
Glsi02g3549 659 Gene3D MFS general substrate transporter like domains 55 608 IPR036259 -
Glsi02g3549 659 MobiDBLite consensus disorder prediction 622 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3549 Glsi-ChrGlsi02 82445771 82451026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3549 74 608 Organic Solute Cotransporters AT1G59740 42.308 3.31e-143 428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3549 02 82445771 82451026 Glsi11g0337 11 2165608 2169367 CCT
Glsi02g3549 02 82445771 82451026 Glsi02g3549 02 82445771 82451026 ECH