Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3467 ATGACCTCTACCATGGCGAGACCGCTCTTGTTTGGTCCACCAAATTCTCATCTCAAAGAACTCCAACATCCTTTTGGAGGTTACATATCTGTTCCCAAGAGTTTCCGCGGTTCACAGTTTTCTCAGCTCGCTCTAAGACACAAACGCAATGTCACGATTCTTCCCATTATTAGAGCCCAGAATCTTCCTGATTATGTTCCGGATTCCAAGTTTTACAAAGTGGAAGCGATTCTCAGGCCCTGGCGAATCCCTCAGGTTTCTTCGGCTTTGTTGGAAATGGGAGTCCGTGGAGTCACAGTATCTGATGCCAGGGGATTTGGTTCCCAGGGTGGTTCAAAAGAGAGGCAGGGAGGTTCTGAATTTTCTGAAGACAAGTTTGTTGCCAAAGTTAAGATGGAAATAGTAGTGAGCAAGGGCCAGGTTGAAGCAGTAATAGACAAGATTATTGAGGAGTCAAGAACTGGAGAGATCGGTGATGGCAAAATTTTCTTGATACCTGTCTCGGATGTTGTAAGAGTTCGCACAGGCGAGCGTGGGGAAATGGCAGAGAGGATGACTGGTGGGACAGCTGGCATATCTTCTGCTGTATAA 591 0.4653 MTSTMARPLLFGPPNSHLKELQHPFGGYISVPKSFRGSQFSQLALRHKRNVTILPIIRAQNLPDYVPDSKFYKVEAILRPWRIPQVSSALLEMGVRGVTVSDARGFGSQGGSKERQGGSEFSEDKFVAKVKMEIVVSKGQVEAVIDKIIEESRTGEIGDGKIFLIPVSDVVRVRTGERGEMAERMTGGTAGISSAV 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3467 196 Pfam Nitrogen regulatory protein P-II 72 179 IPR002187 GO:0006808|GO:0030234
Glsi02g3467 196 ProSiteProfiles P-II protein family profile. 71 183 IPR002187 GO:0006808|GO:0030234
Glsi02g3467 196 SMART P_II_3 74 176 IPR002187 GO:0006808|GO:0030234
Glsi02g3467 196 PRINTS P-II protein signature 72 87 IPR002187 GO:0006808|GO:0030234
Glsi02g3467 196 PRINTS P-II protein signature 123 146 IPR002187 GO:0006808|GO:0030234
Glsi02g3467 196 PRINTS P-II protein signature 154 174 IPR002187 GO:0006808|GO:0030234
Glsi02g3467 196 PRINTS P-II protein signature 93 111 IPR002187 GO:0006808|GO:0030234
Glsi02g3467 196 SUPERFAMILY GlnB-like 72 182 IPR011322 -
Glsi02g3467 196 ProSitePatterns P-II protein C-terminal region signature. 154 167 IPR017918 GO:0006808|GO:0030234
Glsi02g3467 196 Gene3D - 59 193 IPR015867 -
Glsi02g3467 196 PANTHER NITROGEN REGULATORY PROTEIN P-II 41 193 IPR002187 GO:0006808|GO:0030234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3467 Glsi-ChrGlsi02 81870229 81873457 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3467 02 81870229 81873457 Glsi02g3467 02 81870229 81873457 ECH