Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3463 ATGGCTCCTGAACTCGTCCCAACCGCTGTGAAATCTGCTGGGTTCACCAGACCAGCGAGCCTGCCAAGTCGGGCGTATGTCACGTTTCTGGCCGGTAACGCCGACTACGTGAAAGGCGTAGTTGGTTTGGCGAAGGGATTGAGGAAGGTGAAGACGGCATACCCATTGGTGGTGGCCGTGCTGCCCGACGTGCCGGAGGAGCACCGTCGGATCTTAGAGTCTCAGGGATGCATCGTTCGCGAGATCGAACCCGTTTACCCACCCGAGAACCAGACTCAATTTGCCATGGCCTATTACGTCATCAACTACTCGAAGCTGCGTATATGGGAGTTTGTGGAATATAGCAAGATGATATATTTGGACGGAGACATTCAGGTTTACGACAACATTGACCACCTATTTGATCTGCCGGATGGATACTTATACGCCGTAATGGACTGCTTTTGTGAGAAGACTTGGAGTCACACCCCGCAATTCAAGATCGGTTACTGCCAGCAATGCCCAGAAAAAGTTAAGTGGCCCGCTGAATTGGGGGAACGCCCTGCCCTTTATTTCAACGCCGGCATGTGTGTGTTTGAGCCTAGCATCGCCACCTACCAAGATCTCCTCGAGACACTCCAAATCACTCCTCCTACCCCTTTTGCAGAGCAAGACTTCTTGAACATGTACTTCCAGAACATTTACAAGCCAATTCCCTTGGTGTACAACCTCGTGCTAGCAATGTTGTGGCGCCACCCCGAGAATGTAGAGCTTGATAAAGTCAAAGTTGTTCATTACTGTGCTGCGGGTTCCAAGCCTTGGAGGTATACAGGGAAGGAAGAGAACATGGAAAGAGAGGACATAAAGATGCTGGTGAAGAAATGGTGGGACATCTACAACGACGAATCGTTGGATTACAAGAAGGGCACGAGTGTTGTGGAAGGGAATGCCGATTCACTGAAGATGGGGCCGTTGATAGCCGCTTTATCCGAGGCTGGTAAAGTTCAATATGTCACTGCGCCCTCTGCAGCTTAG 1014 0.5069 MAPELVPTAVKSAGFTRPASLPSRAYVTFLAGNADYVKGVVGLAKGLRKVKTAYPLVVAVLPDVPEEHRRILESQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVYDNIDHLFDLPDGYLYAVMDCFCEKTWSHTPQFKIGYCQQCPEKVKWPAELGERPALYFNAGMCVFEPSIATYQDLLETLQITPPTPFAEQDFLNMYFQNIYKPIPLVYNLVLAMLWRHPENVELDKVKVVHYCAAGSKPWRYTGKEENMEREDIKMLVKKWWDIYNDESLDYKKGTSVVEGNADSLKMGPLIAALSEAGKVQYVTAPSAA 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3463 337 SUPERFAMILY Nucleotide-diphospho-sugar transferases 26 299 IPR029044 -
Glsi02g3463 337 FunFam Hexosyltransferase 22 300 - -
Glsi02g3463 337 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 22 300 IPR029044 -
Glsi02g3463 337 PANTHER GLYCOGENIN SUBFAMILY MEMBER 20 298 - -
Glsi02g3463 337 CDD GT8_Glycogenin 24 294 - -
Glsi02g3463 337 Pfam Glycosyl transferase family 8 28 270 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3463 Glsi-ChrGlsi02 81860583 81861799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3463 1 337 Glycosyltransferase AT1G56600 74.203 0.0 526
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3463 02 81860583 81861799 Glsi02g3463 02 81860583 81861799 ECH
Glsi02g3463 02 81860583 81861799 Glsi11g0311 11 2034312 2035601 ECH