Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3459 ATGGATGCCAAGGACATCCTAGGTTTGCCGAAGAATTCTTTGCCAATTCAAGAGAAAAAGTCTCGACCCCAAAAAGATTCACAGAGAAAACCAGATGGCATTTCGCGGGAGGTGTATGCGCTTACAGGTGGTTTGGCACCTCTTATGCCAGCAATTGATTCGTCTCAATTGAAGAAAAAGCCTCCATCGGACGAGAAGATCACTTGGCAGTGGCTTCCATTCACGAACTCTGCTCGCAAAGATAATCTTCAGCTTTACCATTGGGTTCGAGTTGTAAATGGTGTTCCACCAACTGGGGACTATTCTTTTGCCAAGTATAACAAGTCTGTAGACATTATCAAATACACAGACGAGGAGTATGAGAAGTATCTGACAGATCCCATTTGGACAAAGGAAGAGACAGATCAACTGTTTGACTTGTGTGAGAGGTTTGATCTCCGGTTTGTTGTAATAGCTGACAGGTTCCTGTCATCTCGAACTATAGAAGAATTGAAAGATCGATACTACAGTGTATCTCGGGCTATATTAACTGCCAGGGCTCCATCTCCTGGGGACGTTGCATCACATCCTTTTGTCAAGGAACCATATAATGTTTCACAAGAGGTTGAGCGGAAACGAGCACTGTCCATGTACCTTTCTCAAACAAAGCAACAAGAGCGAAAAGATCAAGAGGTTCTTGCTGAGGCAAAAAGAATAACTGAGTCACGTATACCCACAAAGGTTGTGGAAGAGTCTGAGTTGGCTGTTGCACCAAATGCTAGTGCAGAATCTACAGAGAGAATTATCCCTGGTGATACTCCATCAAATGTTCACCTTCCATCCACGGTTGCTCCTTCCACATCAACAGGAGATAATGCATCTACTCTTTCTTCCCTCCGCATACTTCGAGTGTATCTGAGAACATATGCACTTGAGCAAATGGTGCAAGCTGCGAGCTCATCTGCTGGATTACGGACTATCAAACGGGTGGAGCAAACATTGCATGAACTTGGGGTTAATCTAAAGCCAAGGGTTCCAACAAAAGCTGTCTGCGCAGAGCATCTTGAACTTAGAAAAGAAATACTAACTCTGCTGAATCTTCAGAAACAGCTGCAATATAAGGAGGCAGAAGGTTCATCTTTTCGTGATGGTTCATACACTGAAACACCGGGCACGCCAAAGGATAGGACATTTATTGCAGACTCTATGAGTTTTGGAGGGTTGGCAAAAGGGACCAAAAACGCAAGGCACCGGGACGGATTTCAGAAGCTCCATCATCACCAGCTCAGTCTAAGAGACCTAGAAAACTTAAGGCCTCAGATCTATAGCTCCAGTGTGTAA 1320 0.4439 MDAKDILGLPKNSLPIQEKKSRPQKDSQRKPDGISREVYALTGGLAPLMPAIDSSQLKKKPPSDEKITWQWLPFTNSARKDNLQLYHWVRVVNGVPPTGDYSFAKYNKSVDIIKYTDEEYEKYLTDPIWTKEETDQLFDLCERFDLRFVVIADRFLSSRTIEELKDRYYSVSRAILTARAPSPGDVASHPFVKEPYNVSQEVERKRALSMYLSQTKQQERKDQEVLAEAKRITESRIPTKVVEESELAVAPNASAESTERIIPGDTPSNVHLPSTVAPSTSTGDNASTLSSLRILRVYLRTYALEQMVQAASSSAGLRTIKRVEQTLHELGVNLKPRVPTKAVCAEHLELRKEILTLLNLQKQLQYKEAEGSSFRDGSYTETPGTPKDRTFIADSMSFGGLAKGTKNARHRDGFQKLHHHQLSLRDLENLRPQIYSSSV 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3459 439 MobiDBLite consensus disorder prediction 1 36 - -
Glsi02g3459 439 FunFam DNA methyltransferase 1-associated protein 1 97 184 - -
Glsi02g3459 439 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 1 411 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Glsi02g3459 439 CDD SANT_DMAP1_like 129 171 - -
Glsi02g3459 439 SMART sant 125 174 IPR001005 -
Glsi02g3459 439 MobiDBLite consensus disorder prediction 259 285 - -
Glsi02g3459 439 MobiDBLite consensus disorder prediction 252 285 - -
Glsi02g3459 439 Gene3D - 98 183 - -
Glsi02g3459 439 Pfam SANT/Myb-like domain of DAMP1 101 175 IPR032563 -
Glsi02g3459 439 SUPERFAMILY Homeodomain-like 128 171 IPR009057 -
Glsi02g3459 439 MobiDBLite consensus disorder prediction 18 33 - -
Glsi02g3459 439 Pfam DNA methyltransferase 1-associated protein 1 (DMAP1) 313 377 IPR008468 GO:0005634|GO:0045892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3459 02 81800833 81805797 Glsi02g3459 02 81800833 81805797 ECH