Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3457 ATGACCACTCTTCCAGCCCCAGGATTTCCTGAAACCTCGGCTTGTTCCCCAATTAGAGCTCAATCCCAACTACACCCGGTTTTCGTATCCCCGAAACAATCCAAGTTCTTCCCACAAACCCGATTCCTTCACAAGAAAATCACTATACCATTAGTCTCCAACCAATCAAGTACGCCCACGGGCTCTTCCCCTGGATTGTACTCTGCCCAGAAATTCGATCTCACCGTTTCCAACGTGGACCTGGTTCTCGAGGATGTTCGCCCTTACCTCATCGCTGACGGCGGCAACGTCGACGTTGTGTCTGTTGAAGATGGTGTTATATCTCTCAGGCTCCAAGGAGCGTGTGAAAGTTGTCCTAGCTCAACGACAACTATGAAGATGGGGATTGAGCGTGTACTAAAAGAAAAATTTGGAGATGCAGTCAAGGATATACAGCAAATATATGATGAGGAAAAGGAGACAACTGTTGAGGCCGTGAATAATCATCTGGATATCTTGAGACCTGCCATTAAGAATTTTGGAGGCAGCGTGGAAGTATTATCTATTGAAGGAGGGGACTGCCGTGTGAAGTATGTGGGGCCTGACTCCATTGGATCAGGGATCAAAGCAGCAATCAAGGAGAAGTTTTCAGACATTGTGAATGTTGTGTTTTCCAGCTAG 660 0.4682 MTTLPAPGFPETSACSPIRAQSQLHPVFVSPKQSKFFPQTRFLHKKITIPLVSNQSSTPTGSSPGLYSAQKFDLTVSNVDLVLEDVRPYLIADGGNVDVVSVEDGVISLRLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIQQIYDEEKETTVEAVNNHLDILRPAIKNFGGSVEVLSIEGGDCRVKYVGPDSIGSGIKAAIKEKFSDIVNVVFSS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3457 219 Gene3D - 71 154 IPR034904 -
Glsi02g3457 219 FunFam NifU-like protein 3, chloroplastic 71 154 - -
Glsi02g3457 219 Gene3D - 155 217 IPR034904 -
Glsi02g3457 219 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 76 141 IPR034904 -
Glsi02g3457 219 FunFam NifU-like protein 1 chloroplastic 155 217 - -
Glsi02g3457 219 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 63 216 - -
Glsi02g3457 219 Pfam NifU-like domain 80 139 IPR001075 GO:0005506|GO:0016226|GO:0051536
Glsi02g3457 219 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 150 216 IPR034904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3457 Glsi-ChrGlsi02 81796054 81797543 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3457 02 81796054 81797543 Glsi02g3457 02 81796054 81797543 ECH