LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi02g3449	ATGCCAATCTCGTTTCCACCCAGGAAAATGCATATAATGGCTAGAAACATATCCAATATCACCATTGGATGCACAGTCAGGCTTGCGCTTAAAGCCAGATTTTTGACGGAGCATAACCGTGGTTCCCAAGCCTCTTGTGGGGATCTTGTTTGGGGGAGCCCACGGCCCAAGCAACCCTTGCTAGAAAATATTCACAGAGACCCTAATCCTACCTCTATCGGCGTTCGGCCGTGCGGGAATATCGTCGTCTCCACTCTCCGTCACGATGAAGCTATTAGCATAAGTTTAATTAAGAAAGGGCCTTTTATGGCAAATAGACTTGAACCGGATATTGATGATGATTTTAGTGAGCTGTATAAAGAGTACACCGGCCCTCCAGGAACTGCTACTTTTAATACCCAAGAGAGGGCAAAGTCAAACAAGAGGTCTAATGCTGGGTCAGATGAGGAGGAGGAACATCATGATCCTAATGCTGTTCCAACTGATTTCACTAGCCGAGAAGCTAAGGTTTGGGAGGCTAAGTCAAAGGCTTCTGAGAGGAATTGGAAGAAAAGGAAAGAAGAAGAAATGATCTGCAAACTTTGTGGTGAATCAGGGCATTTCACTCAGGGTTGCCCATCTACACTAGGAGCAAATCGCAAGTCTCAAGATTTCTTTGAAAGGATACCTGCTAGAGACAAACATGTAAGAACACTTTTCACTGAGAAAGTTATAAGCAAGATTGAAAGAGATATTGGCTGCAAAGTTAAGATGGACGAGAAATTTATTATTGTCAGTGGTAAGGATAGATTAATTTTGGCAAAAGGTGTCGATGCTGTGCACAAGATCAGAGAGGAGGGTAATCAAAGGGGTTCTTCTAGTTCTCACATGACCAGATCTAGGTCGCCTGAGAGAAGTCCTGTTTTTACTCGGTTTCAACGCTCTGAGCCCCAAAGGTCTCATTCTGGACCTCGAAATACATCCCATTTTCAACAAAGGTTTGGTAGGCAAGAGAGGGTTGTTGAAGACCGTGTGAGAGAGGACTTACAAAAATTTGCAAGAGGTTCTACACAAGCTTATGGAAATAGTGGAGCTAGAGGTCGTTCAAGCCATTCAAGATCTCCAAGACAGGCACCTTATGCAGGAAACTCATATAATTCATATGATGTCCGTAATCAAACCATAGGTGCATATAGAAATGATGGATGGGATTTTCATAGGAGAGAATCTGATATTCAATCTGGTCATCAGTTGGAATATGATGCATTCCCACAGACGTTAGATGAATTAGAGTTGGAGTATAAGAAGGAGGCCACTGAGCTTGTGAAAATTCGTGATAGAGAAGAAGATGAAGAAAATTTCAAGCATCGTAAGGCTATAAGAGATATGAGGGAGAACTACATGAATAAAGTTGCTATGCTGAGGGCCACACACGCCAAACAGTGGGAAGAAATTCTTCAGCTTGATGCCCAGAGGCGTCAGCAGCAGGCTATCCAACAAATGGCCACTTCTGGTTTTAGGGCTTATAAACAGCAGAACTTTTCTGAATATGATAGGTCTACTGCCAATCCTCACTATGCTGGGGCTAGTTTACCCTTGGAATCAAGGAACGGAGGCGTGGAGATTATGTGA	1611	0.4333	MPISFPPRKMHIMARNISNITIGCTVRLALKARFLTEHNRGSQASCGDLVWGSPRPKQPLLENIHRDPNPTSIGVRPCGNIVVSTLRHDEAISISLIKKGPFMANRLEPDIDDDFSELYKEYTGPPGTATFNTQERAKSNKRSNAGSDEEEEHHDPNAVPTDFTSREAKVWEAKSKASERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANRKSQDFFERIPARDKHVRTLFTEKVISKIERDIGCKVKMDEKFIIVSGKDRLILAKGVDAVHKIREEGNQRGSSSSHMTRSRSPERSPVFTRFQRSEPQRSHSGPRNTSHFQQRFGRQERVVEDRVREDLQKFARGSTQAYGNSGARGRSSHSRSPRQAPYAGNSYNSYDVRNQTIGAYRNDGWDFHRRESDIQSGHQLEYDAFPQTLDELELEYKKEATELVKIRDREEDEENFKHRKAIRDMRENYMNKVAMLRATHAKQWEEILQLDAQRRQQQAIQQMATSGFRAYKQQNFSEYDRSTANPHYAGASLPLESRNGGVEIM	536

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi02g3449	536	SUPERFAMILY	Retrovirus zinc finger-like domains	179	211	IPR036875	GO:0003676\|GO:0008270
	Glsi02g3449	536	MobiDBLite	consensus disorder prediction	126	140	-	-
	Glsi02g3449	536	MobiDBLite	consensus disorder prediction	123	161	-	-
	Glsi02g3449	536	ProSiteProfiles	Zinc finger CCHC-type profile.	192	207	IPR001878	GO:0003676\|GO:0008270
	Glsi02g3449	536	MobiDBLite	consensus disorder prediction	277	380	-	-
	Glsi02g3449	536	MobiDBLite	consensus disorder prediction	283	327	-	-
	Glsi02g3449	536	PANTHER	OS01G0252900 PROTEIN	103	520	-	-
	Glsi02g3449	536	MobiDBLite	consensus disorder prediction	141	160	-	-
	Glsi02g3449	536	MobiDBLite	consensus disorder prediction	348	380	-	-
	Glsi02g3449	536	MobiDBLite	consensus disorder prediction	328	344	-	-
	Glsi02g3449	536	Coils	Coil	420	440	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi02g3449	Glsi-ChrGlsi02	81736091	81742996	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Glsi02g3449	02	81736091	81742996	Glsi02g3449	02	81736091	81742996	ECH