Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3445 ATGGCTCCTCCCAACGACCCAGTGATTGCTCCCGTCAGCTTCCTTCCCTCTGACCCTCTGGAAAATATATTTCGCTTATCTGATGGGAAGCTTACTGTCAACGGTTTGCCATTGCTCACACAGGTCCCGGAGAACGTCACTTTCAGCCCGTTCTCTTCTATTTTTCAATCCTCTGAAACTCCTCCATCCTTGCTCCAGCGTGTCCTTTCCCTGTCTCACAAGGGCGGTTTCCTTGGGTTTACCCAGGAAGCGCCCTCCGATAGGTTGACGAACTCCTTGGGTAGATTCAGTGGTAGGGACTTCCTTAGTATCTTTAGGTTCAAAACATGGTGGTCTACCCAGTGGGTCGGAAATTCTGGCTCAGATTTACAAATGGAAACCCAGTGGGTGCTCTTTGATCTTCCTGAAATAAAGTCCTACGCCATAATCATTCCTACCATTGAAGGCAGATTTAGGTCTGCTCTCCATCCTGGCTCTGACGGTCATGTCATGATTTGTGCCGAGAGTGGTTCTACCCAAGTTAAAGCATCGAAATTCGATGCTATTGCTTATATTCATGTGTCTGAAAATCCTTACAACTTGATGAAAGAGGCCTACAGTGCTCTGAGGGTTCACCTCAATACTTTTAGGCTCTTAGAAGAGAAAACAACACCAAATTTGATTGATAAATTCGGATGGTGCACTTGGGACGCATTCTACCTAACCGTCAATCCTGTTGGAGTTTGGCACGGATTGAAAGACTTCGCTGAGAATGGCGTGGCTCCAAGATTTCTCATAATCGATGATGGTTGGCAAAGCATCAATTTGGATGGCGATGACCCCAACGAGGACGCCAAAAATCTTGTTTTAGGTGGTGAACAGATGACCGCAAGGCTTCACAGGCTCGATGAAGGTGATAAGTTCAAAAAGTACAAGGCGGGTCTCATGTTGGGTCCTAATGCTCCTTCTTTCGACCCAAAGAAGATCAAGGCCCTCATCGCAAAGGGAATCGAGCTTGAGCATTTGCAGAGGGACCGCGACGATGCCATCCAATCTGGTAGTGGCAATTTGTCCGAGATTGAATCGGGTATCCAGAAGATAAAACAAGAAATCGATGATCTTTTTGGGGGAGAGCAAAGCAGCGACTCAAACAAAGAATGTGGAAGCCGCAGTTGCAAAGCAGAGGAGGATGGGATGAAGGCTTTCACAAGGGATTTGAGGACCAAATTCAAAGGTTTGGATGACATTTACGCGTGGCATGCCCTTTGTGGCGCCTGGGGTGGTGTGAGGCCAGGAGCAACCCACCTAAATTCCAAAGTAATCCCCTGCAAACTCTCCCCTGGGCTTGATGGGACAATGCCTGATCTTGCTGTGGTGAACATCGTTAAAGGTTCAATCGGGCTTGTTCATCCTGATCAAGCCAATGACTTTTATGACTCTATGCACTCACATCTTGCCAAATCTGGTATTACAGGAGTCAAAGTGGATGTCATTCATACTCTTGAGTATGTGTGCGAAAAATATGGAGGCAGAGTGGAGCTTGCCAAAGCTTACTATGATGGGTTGACAAACTCCATTGTGAAAAATTTCAATGGAAGTGGACTCATCGCTAGCATGGAACAGTGCAATGACTTTTTCTTCCTTGGGACGAAGCAAATTTCTCTGGGAAGAGTTGGGGATGACTTTTGGTTCCAAGATCCTAATGGTGACCCAATGGGAGTCTTCTGGTTACAAGGGTTACATATGATTCACTGTGCTTATAACAGCTTGTGGATGGGGCAGATGATTCAGCCTGATTGGGACATGTTCCAATCAGACCATGTGAGTGCCAAATTTCATGCAGGGTCAAGGGCCATTTGTGGGGGTCCAGTCTATCTGAGTGACTCCGTGGGTTCTCATGATTTTGATCTCATTAAGAAGCTTGTGTATCCTGATGGCACCGTACCAAAGTGCACACATTTTCCCCTTCCAACCAGAGATTGTCTTTTCAAGAACCCTCTGTTCGACCAGAAAACCGTTCTCAAGATTTGGAATTTCAACAAGTGCGGTGGGGTGATTGGTGCTTTCAATTGCCAAGGTGCCGGTTGGGACACCAAGGAGCACAGGTTCAAGGGCTTCCCTGAGTGCTACAAGGCAGTTTATGGTTCGATACATGTATCTGAGGTTGAATGGGAGCAGAAGAAAGAAGCAGCCCATATGGGTGAGGCAGAGGAATACGTAGTGTACCTCAACCAAGCCGGGGAACTGCGTCTGACGACCCCAAAGTCCGAACCATTCCAAATTACTATCCAACCTTCAGCCTTTGAGCTCTTCAGCTTCGTACCAGTCGCGAAGCTAAAGCGGAGCATCAAATTTGCACCAATTGGGTTAACAAACATGTTCAACAGCGGAGGGACAATTGAAGAAGTGGAATACGTAGAGAGTGGTGCGAAGGTGAAGGTTAAAGGCGGGGGAACTTTTCTGGCTTACTCGAGCGAGTCTCCTAAGAAATGTGAACTGAATGGTGGTGAGGCGGCTTTTGAGTGGAAGCCTGATGGCAGATTGATGCTCACCCTTGCTTGGAATGAAGAGGCTGGCGGATTTTCTGATTTAGCATTATTCTACTAG 2586 0.4706 MAPPNDPVIAPVSFLPSDPLENIFRLSDGKLTVNGLPLLTQVPENVTFSPFSSIFQSSETPPSLLQRVLSLSHKGGFLGFTQEAPSDRLTNSLGRFSGRDFLSIFRFKTWWSTQWVGNSGSDLQMETQWVLFDLPEIKSYAIIIPTIEGRFRSALHPGSDGHVMICAESGSTQVKASKFDAIAYIHVSENPYNLMKEAYSALRVHLNTFRLLEEKTTPNLIDKFGWCTWDAFYLTVNPVGVWHGLKDFAENGVAPRFLIIDDGWQSINLDGDDPNEDAKNLVLGGEQMTARLHRLDEGDKFKKYKAGLMLGPNAPSFDPKKIKALIAKGIELEHLQRDRDDAIQSGSGNLSEIESGIQKIKQEIDDLFGGEQSSDSNKECGSRSCKAEEDGMKAFTRDLRTKFKGLDDIYAWHALCGAWGGVRPGATHLNSKVIPCKLSPGLDGTMPDLAVVNIVKGSIGLVHPDQANDFYDSMHSHLAKSGITGVKVDVIHTLEYVCEKYGGRVELAKAYYDGLTNSIVKNFNGSGLIASMEQCNDFFFLGTKQISLGRVGDDFWFQDPNGDPMGVFWLQGLHMIHCAYNSLWMGQMIQPDWDMFQSDHVSAKFHAGSRAICGGPVYLSDSVGSHDFDLIKKLVYPDGTVPKCTHFPLPTRDCLFKNPLFDQKTVLKIWNFNKCGGVIGAFNCQGAGWDTKEHRFKGFPECYKAVYGSIHVSEVEWEQKKEAAHMGEAEEYVVYLNQAGELRLTTPKSEPFQITIQPSAFELFSFVPVAKLKRSIKFAPIGLTNMFNSGGTIEEVEYVESGAKVKVKGGGTFLAYSSESPKKCELNGGEAAFEWKPDGRLMLTLAWNEEAGGFSDLALFY 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3445 861 PANTHER - 24 850 IPR008811 -
Glsi02g3445 861 SUPERFAMILY (Trans)glycosidases 220 634 IPR017853 -
Glsi02g3445 861 Gene3D Aldolase class I 221 634 IPR013785 -
Glsi02g3445 861 Pfam Raffinose synthase or seed imbibition protein Sip1 24 843 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3445 Glsi-ChrGlsi02 81709530 81712420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3445 7 861 Glycoside Hydrolase AT4G01970 58.641 0.0 1056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3445 02 81709530 81712420 Glsi02g3445 02 81709530 81712420 ECH