Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3437 ATGGAAGATTTAAGTGGTGCCCAGTTTGATGGCCTAAGTAATGCTGTAAGGAAGAAGCGTAGTCAAACTTCTCGCCGACCTCGACCTGATTCACAGCCTGTTTCTGAATGTCATGATCTGTCTTCCTTGTCATCAACACCCCCTTCAGATGATGTGGGCAAGGCCTCTAGTGATGAGAATGCTGGTTATGAAACTAATTCTAAGAGAAAAGAATTTAATCTTAACCATTATGTCACCAGAGTCTCCTCTGCTGCTGCAGCTGAAGATGTTAAATCCCATATGAAGAATACAAATGATGCAGGATTTCATGTGTTTTATAATAATGAGCCTGGACATGGTTTCTATAAACGCAGTAGTGAAGGTGTCCTTTCTCCTGCTAATTGGAAAGGCTCTAGCAAATCAATGGATAGCTTGGAATCAGAATCAAGATGTGCAGACGTTTATGGTGGAAGGAATTCTGAGGGTGTGTGTTTGGGGCAGTCAGGAGTTCCTGAGGATGGATTGGGGAATGAGAACAGGGTTAAAAAGGTTAAACTCAAGGTTGGTGGTGTGATGCGTACTATCCAAGCTAACTCTGCATCTAACAGTTCATCTGGAAGTGGGTCCACTGCAAAGAGCTCTCGATCATTAGATGCCTCAAGAACATGCGCAAAACAACAGGGAAATTCAGATGATAACCATTCTCTCTCAGATAGGAGGAATGGCATACAAGGCATTCCGTGGAAGGATTTCTCAAGGGGTGGATTTGGTCTTGGGAAGGGGGATTATATGATGGGAAAGATGTTAGGAAAGAACACATCTGGTAAGCAAGGAGACATGTCTGAACCAGTTCGTAAGAGCAAGCGAGTACCAAAAAGGCGTGTACTTGATGGGGAATTTAGTGACGATGATGACAACGATGACGAGATTCGCTATTTGGAAAAGCTCAAAACTTCAAAAGTTTCTACCATGTATAGAGATGATGAAGAATTAAGCAAAAAACATCAAAAATTATCTAGTGTCTCTAATATGGTATATACTGCTACGTCAAGGTCAGGCAAAGATGGTAAAAAAAGGTCAAGATCAGATGGAAATTATGAGGACACAGACTATGAGGAAGACGAGGAGTCAGGATCTGATGGTGAGCCTGAGGACAAGAAAAAGAGGAAGCAGAAGAAGGAATCTGTTGATGTATTGATGGATGGTAAGAGGGAAATGACTCTCACAATGCGCCAAAGAGCTCTTCAGTCTAGCAAAGATGCATCTGCATCTGGTGCAAGTTTAATTGAGTTTCCTAATGGGTTACCACCTGCCCCACCTAGAAAGCAAAAGGAAAAGCTTTCAGAAGTGGAGCAGCAACTAAAGAAAGCCGAAGCTGCCCAGAGGCGTAGAATGCAAGTTGAGAAAGCTGCTAGGGAATCTGAGGCTGAAGCTATCAGAAAAATACTTGGTCAAGATTCCAGTAGGAAGAAGCGGGAAGACAAAATTAAGAAACGCCAAGAAGAACGGGCACAGGAGAAGGCAGCCAATGCGCAGATGCTTGCTTCAAACACCATCAGATATGTGATAGGTCCTGCTGGCACGGTTGTGACTTTTCCTGAGGAGGTCGGCTTGCCAACTATATTTAACTCCAAACCCTCCAGTTATCCTCCTTCGCGTGAGAAGTGTGTGGGTCCATCTTGTACCAACCCATACAAATATCGGGATTCAAAGTCTAAGCTTCCTCTTTGCAGTCTGCAGTGCTACAAGGCAGTCCAGGTCCTCCAGGAGACCATGGCAGCTAAAACTTCCTGTTGA 1776 0.4386 MEDLSGAQFDGLSNAVRKKRSQTSRRPRPDSQPVSECHDLSSLSSTPPSDDVGKASSDENAGYETNSKRKEFNLNHYVTRVSSAAAAEDVKSHMKNTNDAGFHVFYNNEPGHGFYKRSSEGVLSPANWKGSSKSMDSLESESRCADVYGGRNSEGVCLGQSGVPEDGLGNENRVKKVKLKVGGVMRTIQANSASNSSSGSGSTAKSSRSLDASRTCAKQQGNSDDNHSLSDRRNGIQGIPWKDFSRGGFGLGKGDYMMGKMLGKNTSGKQGDMSEPVRKSKRVPKRRVLDGEFSDDDDNDDEIRYLEKLKTSKVSTMYRDDEELSKKHQKLSSVSNMVYTATSRSGKDGKKRSRSDGNYEDTDYEEDEESGSDGEPEDKKKRKQKKESVDVLMDGKREMTLTMRQRALQSSKDASASGASLIEFPNGLPPAPPRKQKEKLSEVEQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQDSSRKKREDKIKKRQEERAQEKAANAQMLASNTIRYVIGPAGTVVTFPEEVGLPTIFNSKPSSYPPSREKCVGPSCTNPYKYRDSKSKLPLCSLQCYKAVQVLQETMAAKTSC 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3437 591 PANTHER INO80 COMPLEX SUBUNIT B 10 582 IPR029523 GO:0006338|GO:0031011
Glsi02g3437 591 SMART PAPA_1_2 444 529 IPR006880 GO:0031011
Glsi02g3437 591 Pfam PAPA-1-like conserved region 444 529 IPR006880 GO:0031011
Glsi02g3437 591 MobiDBLite consensus disorder prediction 403 417 - -
Glsi02g3437 591 MobiDBLite consensus disorder prediction 274 293 - -
Glsi02g3437 591 MobiDBLite consensus disorder prediction 190 239 - -
Glsi02g3437 591 MobiDBLite consensus disorder prediction 319 502 - -
Glsi02g3437 591 MobiDBLite consensus disorder prediction 190 224 - -
Glsi02g3437 591 MobiDBLite consensus disorder prediction 27 53 - -
Glsi02g3437 591 MobiDBLite consensus disorder prediction 435 499 - -
Glsi02g3437 591 Coils Coil 436 470 - -
Glsi02g3437 591 MobiDBLite consensus disorder prediction 345 359 - -
Glsi02g3437 591 MobiDBLite consensus disorder prediction 374 401 - -
Glsi02g3437 591 CDD UDM1_RNF168 442 507 - -
Glsi02g3437 591 MobiDBLite consensus disorder prediction 1 70 - -
Glsi02g3437 591 MobiDBLite consensus disorder prediction 260 299 - -
Glsi02g3437 591 Pfam HIT zinc finger 546 576 IPR007529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3437 Glsi-ChrGlsi02 81672012 81674828 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3437 02 81672012 81674828 Glsi02g3437 02 81672012 81674828 ECH