Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3322 ATGGCAGCCAAACCGGTTGAAGAAGCTCTTCCTGGACAAACCTTGAAATACCAGACGTGGGTCTTGAAAGTCTTACTCCACTGCGAAGGCTGCAAGAAGAAAGTCAAGAAAGTTCTTCAGGGAATCGATGGGGTTTATACCACGGAAATTGATTCTCCGCGGCACAAGGTGACGGTGACTGGTAACGTGGACGCTGAGACTCTCATTAAGAAGCTTCTAAGATCAGGGAAATTAGCGGAGCTTTGGCCAGAAAAACTCGAGATTAAGAAAGATAACAAGTCTGGAAAATCCAAAGGTGGTAATAAGAAGACGGAAGATCAAAAAAATAGTGAACCATTTGGCGATCATGAACAAAAGGGTTCACCTGCTGCAGAGGCAGACGTCAAAGAAGATAGTGAAATTGACGAGTCTGGAGGAGGAGGAGAAGGAGGAGGCGGTGGTGAAGGCGGTAAAAAGAAGAAAAAGAAGAAGAAGAACAAGGGGCAAAATGGTGTCTCTTCCAATAATGGAGGTGAAGAAAATATAACTGAAGCAGTACCGGTCACTGGTTCAGCCTTTACCGGCGGCCCGAACTTGGGTACTTCAATGGCTTCCATGGATCTTACCCCCCCGCTTCAGCATTCCTACCCATACCCACAAATGTACGACTCACCTCCTCAAATATATCAATATGGGCTAAGCTATAACACAGCATATCCCAGCTCTAGTTCTTCGTATTATACCCCTTCCATGCATGGTTATTCTACGAGCTCTCGCCTGCCGCCGCCACCTCCGCCCTCTGATCTGATCAATCATTACAGTGATGACGATGACTATGAAGTTCAAAAAGGTTGTGGACAAAAATTAGTAGAGGGTGTTTGCAGGCTTCCGATCTCACCCACAAACTTATCTTCCGATCACATGGCCACCGTCATCGATGGCAAAGCCGTCGCCCAAGCCATCCGATCTGAAATTTCCGAAGAGGTTCGCATTCTCTCTCAAAAATACGGCAAGGTTCCGGGACTTGCAGTAGTGATTGTAGGGAACAGGAAGGATTCACAAAGCTATGTGAGTATGAAGAGAAAGGCGTGTGCTGAAGTTGGGATCAAGTCCTTTGACGTAGACCTTCCTGAGCAAGTATCCGAAGCCGAATTAGTCAAACAAGTCCACGAATTAAATGCTAATCCTGATGTACATGGTATATTGGTTCAACTTCCATTGCCAAAGCATATAAATGAAGAGAAAGTTTTGACTGAAATCAGCCTTGATAAAGATGTAGATGGATTTCATCCTTTAAACGTCGGCAAGCTTGCAATGAAAGGCAGAGAACCTCTATTTCTTCCGTGCACTCCCAAGGGATGTCTTGAACTTCTACACCGAAGTGGTATAAGTATAAAGGGCAAGAAGGCAGTTGTGGTTGGTCGAAGTAACATAGTTGGATTGCCAGTTTCAATGCTTCTTCTTAAAGCGGATGCTACAGTTACCATTGTCCATTCACACACAAGTGAACCTGAAACAATCATACGCGAAGCAGATATTGTAATTGCAGCTGCAGGACAGCCAATGATGATCAAGGGTAGTTGGATCAAACCTGGAGCTGCAGTCATAGATGTTGGCACAAATGCTGTCGATGACCCAACGAAGAAGTCAGGTTATAGGCTTGTTGGAGATGTAGATTTTGAGGAAGCATCTAAAGTAGCTGGATGGATAACGCCTGTTCCTGGTGGTGTGGGCCCAATGACCGTCACAATGTTGCTCAGGAATACCTTGGACGGTGCCAAACGCAACCTTGAGCGGACTAACTGA 1785 0.4555 MAAKPVEEALPGQTLKYQTWVLKVLLHCEGCKKKVKKVLQGIDGVYTTEIDSPRHKVTVTGNVDAETLIKKLLRSGKLAELWPEKLEIKKDNKSGKSKGGNKKTEDQKNSEPFGDHEQKGSPAAEADVKEDSEIDESGGGGEGGGGGEGGKKKKKKKKNKGQNGVSSNNGGEENITEAVPVTGSAFTGGPNLGTSMASMDLTPPLQHSYPYPQMYDSPPQIYQYGLSYNTAYPSSSSSYYTPSMHGYSTSSRLPPPPPPSDLINHYSDDDDYEVQKGCGQKLVEGVCRLPISPTNLSSDHMATVIDGKAVAQAIRSEISEEVRILSQKYGKVPGLAVVIVGNRKDSQSYVSMKRKACAEVGIKSFDVDLPEQVSEAELVKQVHELNANPDVHGILVQLPLPKHINEEKVLTEISLDKDVDGFHPLNVGKLAMKGREPLFLPCTPKGCLELLHRSGISIKGKKAVVVGRSNIVGLPVSMLLLKADATVTIVHSHTSEPETIIREADIVIAAAGQPMMIKGSWIKPGAAVIDVGTNAVDDPTKKSGYRLVGDVDFEEASKVAGWITPVPGGVGPMTVTMLLRNTLDGAKRNLERTN 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3322 594 CDD NAD_bind_m-THF_DH_Cyclohyd 416 587 IPR020631 GO:0004488
Glsi02g3322 594 Gene3D - 16 86 - -
Glsi02g3322 594 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 423 589 IPR020631 GO:0004488
Glsi02g3322 594 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 305 420 IPR020630 GO:0004488
Glsi02g3322 594 SUPERFAMILY HMA, heavy metal-associated domain 17 82 IPR036163 GO:0046872
Glsi02g3322 594 Hamap Bifunctional protein FolD [folD]. 302 590 IPR000672 GO:0004488
Glsi02g3322 594 Pfam Heavy-metal-associated domain 25 74 IPR006121 GO:0046872
Glsi02g3322 594 ProSitePatterns Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 375 400 IPR020867 GO:0003824
Glsi02g3322 594 MobiDBLite consensus disorder prediction 90 136 - -
Glsi02g3322 594 PANTHER C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED 301 588 - -
Glsi02g3322 594 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 422 588 IPR036291 -
Glsi02g3322 594 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 563 581 IPR000672 GO:0004488
Glsi02g3322 594 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 546 562 IPR000672 GO:0004488
Glsi02g3322 594 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 456 476 IPR000672 GO:0004488
Glsi02g3322 594 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 505 534 IPR000672 GO:0004488
Glsi02g3322 594 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 333 355 IPR000672 GO:0004488
Glsi02g3322 594 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 374 401 IPR000672 GO:0004488
Glsi02g3322 594 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 409 430 IPR000672 GO:0004488
Glsi02g3322 594 ProSitePatterns Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 567 575 IPR020867 GO:0003824
Glsi02g3322 594 MobiDBLite consensus disorder prediction 90 187 - -
Glsi02g3322 594 CDD HMA 26 80 IPR006121 GO:0046872
Glsi02g3322 594 Gene3D Leucine Dehydrogenase, chain A, domain 1 307 583 - -
Glsi02g3322 594 FunFam Bifunctional protein FolD 307 447 - -
Glsi02g3322 594 ProSiteProfiles Heavy-metal-associated domain profile. 17 80 IPR006121 GO:0046872
Glsi02g3322 594 Gene3D - 305 566 - -
Glsi02g3322 594 FunFam Bifunctional protein FolD 439 566 - -
Glsi02g3322 594 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 301 421 IPR046346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3322 Glsi-ChrGlsi02 81066823 81072414 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3322 02 81066823 81072414 Glsi02g3322 02 81066823 81072414 ECH