Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3252 ATGAAGAAAGGGAAGGGCAAGAACAACGGTTTGTTGCCCAATTCATTGAGGATTATCTCTTCGTGCCTCAAGACTGTGTCCACAAATGCTAGCACCGTTGCTTCCACTGTACGCTCTGCTGGCGCCTCCGTTGCTTCTTCCATTTCCTCTGCTTCTGAGGATCACAAAGATCAGGTGATGTGGGCTGGTTTTGACAAGCTAGAGCTTGATCCGTCTATCTTTAAACACGTTCTTTTACTTGGTTATCTGAACGGATTTCAAGTTCTTGATGTGGAGGATGCCTCTAGCTTCAGTGAACTGGTCTCAAAGCGTGATGGACCTGTTTCTTTCTTACAGATGCAGCCCTTACCTGTAGGCTCTGATGGCCAGGAGGGATTTAGAAAATCACATCCTTTACTGCTGGTTGTTGCTGGGGATGACACCAGCAGTAAATCCCAAAACCGCACCCATTTGGTTGGTTTAGGAAGAGATGGTAATTTGGAGACTCAGTCTGGAAACTGTGTCAACTCTGCAACTGCTGTTCGGTTTTACTCCCTGAAGTCTCATTGTTATGTTCATGTTCTGAGATTCCGATCAACAGTGTGTATGATCAGATGCAGTTCTCGGATAGTAGCTGTTGGTCTTGCCACACAAATATACTGCTTTGATGCATCGACTCTTGAGAATAAATTTAGTGTGCTCACCTATCCTGTTCCTCAGCTAATGGGACAAGGAATGGCAAGTGTTAATGTTGGTTATGGACCAATGGCAGTGGGTCCAAGGTGGTTAGCATATGCTTCCAATAATCCACTGCCCTCAAATGTAGGCCACATAAGCCCACAAAATCTGAGTCCTTCTCCAGGAGTTAGCCCGTCAACATCTCCAGGGAGTGGTAGTTTGGTTGCTCGTTATGCCATGGAGTCCAGCAAACAATTGGCGTCTGGAATAATCAAATACTGTCAAGAGCTGCTTCCTGATGGTTCTAATTCTCCAGTACCGTCAAATTCAGGCTGGAAAGTTGGTAGGGTTACGGGAATGGATATGGATAATGCAGGAATGGTTGTTGTGAAAGATTTTGTTTCCAGAGCTATCATCTCACAGTTTAAAGCTCACACTAGTCCTATATCTGCACTATGTTTTGACCCTAGTGGGACCCTTCTGGTCACTGCCTCAGTCTATGGGAATAACATTAATATCTTCCGGATAATGCCATCATGCGCACGCAAAGGACCAGGTGTTCCAAGCTATGACTGGAGCTCTTCTCATGTGCATCTTTATAAACTTCATCGTGGAATAACATCAGCTATAATCCAGGACATTTGTTTTAGTCATTTTAGTCAATGGATTGCAATTGTCTCGTCCAAGGGGACTTGTCATCTTTTTGTTTTGTCTCCGTTTGGAGGTGATACTGGTTTTCGAATTATTAATTCTCAAGGGGAAGAACCCTCCTTGCTTCCAATTTTATCTCTACCTTGGTGGTCCACTTCATATTCTACATCCAATCAGCAATCTTTGCCTCCTCCAACACCTGTTGTCCTTTCTGTGGTGAGCCGGATAAAATATAGCAGTTTTGGATGGCTTAATACAGTTCAAAATTCTGCTACTAATGTGACAGGAAAAGTTTTTGTGCCCTCTGGTGCTCTTGCTGCTGTCTTTCATAATTCCTTATCTCACTCACAGCAGCATGTCAATATAAAGACAAAATCCCTAGAGCATCTGTTGGTATATACACCATCTGGTCATGTTGTTCAACATGAACTTCTGCCATCCGTTGGTCCAGAACCTAGTGATAGTGGTTCAAGAACCCAGTCAGCTTCACTCCTGCATATGCAGGAGGATGAGTTCAGAGTAAAAGTTGAACCTATTCAATGGTGGGATGTATGTAGAAGGTCGGAATGGCCAGAAAGAGGGGATCCTTGCTGCAATACCTTTGATAGACAAGATGGTAGTGAGATAGTTCAAGAGAAAACATGTTCCGGTGATGGTTATGGATTGGAATTTTTGGATATAAGTGATGGTGTTGGGGAAAAGCAAGTAGTAAATTGTTCTACTGGAAAGGATCAAGAGAGATCCCACTGGTATCTATCTAATGCTGAGGTGCAAGTAAACTTTGGAAGGCTGCCCATATGGCAAAAGTCCAAGATTTGCTTCTACACAATGATTTCTGTGAGAACTAGTCCTATTGCTGGTGGAGAGTCTGAAATTGAACAGATCTCTGTTAATGAAGTTGAAATAAGACGGAAGGAGTTGTTGCCTGTTTTTGACCATTTCCATAGCATCAGACCGAGCTGGAATGAGAGAGACTTAACTGGGGAAAGATTTTCAAGTTCTACATCTTCAGTTTCTCATCAGACTGAAGACAAGCCAACTGCTGAAGTGACAGTCATTTGTCACTCAAAGCCAGCATCACTCAGCTCTACCGAAAGCTCTGATGGGGGTTCATCAAGAAGAATTGAAAATTTCCTTGAACTGGATCAAGTTGCATCTAGTTGCCAGATGCTTAATGATATCTACCTGGAAAGAATGGGGGCTATCAATGTTGAGCCTGCCCTGCAGAATCATATGTTGCTGGATAATTTTTCTTCTCTTTCTGGAAACATGAAGCATGTGGATTCTCATGCTGACCATTGTATCTCAGGCAGTTCATTATTGCAAGGGAAAAGGATAACTTCTGGAGGAAGAGATATTGCAGGTGTTAGGATCAGTGAGAGCTCAGCATCACTACTTGAACAACATGCTTCAGGTAAGAGCAAACTTTTGGAGGTGCCAGCATTAATACACAATGCAGGAGTTGTTAGGCAATCTTTCCAGGATGGCAATTGCAAGATGGAGCAGCATGGAAGCAACACGTTGGGTGAAGTTGTAACTGATGACGTTGACGGCAGTTGTAGCCACCTTGAAAGAGAGCAAACCGAGGAGGATGGGGAAAATGGTGAGATGCTTGGTGGCATGTTTGCCTTTTTGGAAGAAGGTAAATTTCAAGGCTGTAGCTGCATCTGCAGTGATTCTGTTACTCTTTTGTCGTCATATCACATGTAG 3018 0.4341 MKKGKGKNNGLLPNSLRIISSCLKTVSTNASTVASTVRSAGASVASSISSASEDHKDQVMWAGFDKLELDPSIFKHVLLLGYLNGFQVLDVEDASSFSELVSKRDGPVSFLQMQPLPVGSDGQEGFRKSHPLLLVVAGDDTSSKSQNRTHLVGLGRDGNLETQSGNCVNSATAVRFYSLKSHCYVHVLRFRSTVCMIRCSSRIVAVGLATQIYCFDASTLENKFSVLTYPVPQLMGQGMASVNVGYGPMAVGPRWLAYASNNPLPSNVGHISPQNLSPSPGVSPSTSPGSGSLVARYAMESSKQLASGIIKYCQELLPDGSNSPVPSNSGWKVGRVTGMDMDNAGMVVVKDFVSRAIISQFKAHTSPISALCFDPSGTLLVTASVYGNNINIFRIMPSCARKGPGVPSYDWSSSHVHLYKLHRGITSAIIQDICFSHFSQWIAIVSSKGTCHLFVLSPFGGDTGFRIINSQGEEPSLLPILSLPWWSTSYSTSNQQSLPPPTPVVLSVVSRIKYSSFGWLNTVQNSATNVTGKVFVPSGALAAVFHNSLSHSQQHVNIKTKSLEHLLVYTPSGHVVQHELLPSVGPEPSDSGSRTQSASLLHMQEDEFRVKVEPIQWWDVCRRSEWPERGDPCCNTFDRQDGSEIVQEKTCSGDGYGLEFLDISDGVGEKQVVNCSTGKDQERSHWYLSNAEVQVNFGRLPIWQKSKICFYTMISVRTSPIAGGESEIEQISVNEVEIRRKELLPVFDHFHSIRPSWNERDLTGERFSSSTSSVSHQTEDKPTAEVTVICHSKPASLSSTESSDGGSSRRIENFLELDQVASSCQMLNDIYLERMGAINVEPALQNHMLLDNFSSLSGNMKHVDSHADHCISGSSLLQGKRITSGGRDIAGVRISESSASLLEQHASGKSKLLEVPALIHNAGVVRQSFQDGNCKMEQHGSNTLGEVVTDDVDGSCSHLEREQTEEDGENGEMLGGMFAFLEEGKFQGCSCICSDSVTLLSSYHM 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3252 1005 Gene3D - 52 495 IPR015943 GO:0005515
Glsi02g3252 1005 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 3 967 IPR045142 GO:0006914
Glsi02g3252 1005 MobiDBLite consensus disorder prediction 764 782 - -
Glsi02g3252 1005 SUPERFAMILY WD40 repeat-like 147 454 IPR036322 GO:0005515
Glsi02g3252 1005 SMART WD40_4 354 394 IPR001680 GO:0005515
Glsi02g3252 1005 SMART WD40_4 412 455 IPR001680 GO:0005515
Glsi02g3252 1005 FunFam Autophagy-related protein 18h 44 472 - -
Glsi02g3252 1005 Pfam Breast carcinoma amplified sequence 3 501 745 IPR022175 -
Glsi02g3252 1005 MobiDBLite consensus disorder prediction 764 783 - -
Glsi02g3252 1005 MobiDBLite consensus disorder prediction 269 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3252 Glsi-ChrGlsi02 80614915 80620642 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3252 02 80614915 80620642 Glsi02g3252 02 80614915 80620642 ECH