Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3249 ATGCTCTCCTCTCGCCGAGAGCCTATTCCCTCTCATAACCACTTTTCCATTATGCTCAAACTCTTCAACAAGAACCTCCGGCGCTTCTGCTCTCATCTCCGATGCCCGCTTCGCCGCCGTTCCAAGTCCAAAATAGTCATCAAAAAATTCGGAAAACCCAACCCAAAACCTCAAAATGATGCTAAACGTGAATCAAGCATTGATGGGTTGGCGGTGGTTCATCCTAATACTCAATTGGGTGGCCCAGGATCAGAGAAACCAGTACGGATTGCCACCTTTAATGCTGCCCTGTTCTCCATGGCACCTGCGCTTCCAAAGGCAGAAAAAGCAGCCACCTTTGACGATGAAAATGGAGGTGTTCTCAAACTTTTACGACCTTCCGACGTGAATTTACGAGCAAAGTCAGCGAATGATCGCCCAAAAAGTATACTAAAGCAATCGCCTCTGCATCCCAATTTCATGAATAGCCCAGACAATCTCAGCAGGCAACAGAAGTACGCGAAATCAAAGTTGAGAGTTTCAATCAATTTACCAGACAACGAGATTTCTTTACTGCGAAATCGACAATTGAGCTTCTCCGAGTACGGAAAAGAGGGCTCTTCAAGTATAAACAACATTTCTAGAGGGAGGGTTCCCATGAAACCCAGCGTGAGTTTTTCTAGTTATACGGGAAATGGTGTCGACAATCACAGCTATAGAAGCGGCAGAACAGTGCTTGATGTTCTGAGAGAATTGGACGCTGACATTTTGGCACTGCAAGATGTGAAGGCAGAGGAAGAAAATGCCATGAAACCTTTGTCAGATTTGGCTACCTCTCTGGGAATGAACTATGTGTTTGCCGAAAGCTGGGCTCCGGAGTACGGCAGCGCCATCTTGTCCAAGTGGCCGATTATACGGTGGAAAGTTCAGAAAATCTTTGACGATACCGATTTCAGGAACGTTCTGAAGGCCACTATCGACGTACCCGAAGTAGGAGAAGTCAACTTCTACTGTACACACCTTGATCATCTTGATGAGAATTGGCGGATGAAGCAGATAAATGCAATAATCCAATCTAATGACGAGCCTCACATCTTAGCTGGAGGTCTTAATTCACTTGACGAAACTGATTACTCCCAAGAAAGATGGACAGACATTGTAAAGTACTATGAAGAGATGGGAAAGCCTAGACCAAAGGTTGAAGTGATGAGATATCTAAAGAGTAAACACTACACAGATGCAAAAGACTTCGCAGGGGAATGCGAATCAGTTGTCATGATTGCCAAAGGCCAAAGTGTCCAAGGGACGAGTAAGTATGGAACTCGGGTAGATTACATATTATCATCCTCAAACTCTCCTTATAAGTTCGTTCCAGGATCCTATTTAGTCCTTTCTTCTAAGGGGACATCAGATCATCACATAGTGAAAGTTGATGTTGTAAAAGTAAATAGCGATCCTGAAGAAAATGTGATAAAGAAGGAGCAGCGACAAACAAGACACAAAGTTGTAAGAATAACAGAGTCGAATCCATCAAAAGGTATATGGAAAACACACACCGGAGACACAGATTGA 1551 0.4397 MLSSRREPIPSHNHFSIMLKLFNKNLRRFCSHLRCPLRRRSKSKIVIKKFGKPNPKPQNDAKRESSIDGLAVVHPNTQLGGPGSEKPVRIATFNAALFSMAPALPKAEKAATFDDENGGVLKLLRPSDVNLRAKSANDRPKSILKQSPLHPNFMNSPDNLSRQQKYAKSKLRVSINLPDNEISLLRNRQLSFSEYGKEGSSSINNISRGRVPMKPSVSFSSYTGNGVDNHSYRSGRTVLDVLRELDADILALQDVKAEEENAMKPLSDLATSLGMNYVFAESWAPEYGSAILSKWPIIRWKVQKIFDDTDFRNVLKATIDVPEVGEVNFYCTHLDHLDENWRMKQINAIIQSNDEPHILAGGLNSLDETDYSQERWTDIVKYYEEMGKPRPKVEVMRYLKSKHYTDAKDFAGECESVVMIAKGQSVQGTSKYGTRVDYILSSSNSPYKFVPGSYLVLSSKGTSDHHIVKVDVVKVNSDPEENVIKKEQRQTRHKVVRITESNPSKGIWKTHTGDTD 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3249 516 SUPERFAMILY DNase I-like 236 472 IPR036691 -
Glsi02g3249 516 Coils Coil 242 262 - -
Glsi02g3249 516 Pfam Endonuclease/Exonuclease/phosphatase family 231 465 IPR005135 GO:0003824
Glsi02g3249 516 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 86 492 - -
Glsi02g3249 516 Gene3D Endonuclease/exonuclease/phosphatase 217 474 IPR036691 -
Glsi02g3249 516 MobiDBLite consensus disorder prediction 136 160 - -
Glsi02g3249 516 FunFam Endonuclease/exonuclease/phosphatase family protein 224 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3249 Glsi-ChrGlsi02 80599759 80602929 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3249 02 80599759 80602929 Glsi02g3249 02 80599759 80602929 ECH