Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3169 ATGGATTCCCCTGTGAACAGCCCGTCATCAATGGGCAAGGGATACTGTCCTTCACAAAACCCTAGAATCCAAAACCTCATCCAAGTGGACCATCTCCTCGAATCTTTCCTCGGCCTTTCTGAAGTCCCTTCTCTCTCCGTCGATCTCTCCTTGGAGAGGCTTCTCGATTCAGTCCGTACCGATGCCGATCAGACCCTTCTCATCGATCGCGCCTTTAATATGGGATCCATGCTTCTCGATGCTGCCAAACACTCCTCCAGAAAGCGAGCTTCCAAGCACAATTCTTTCGCTTGGCCTCTTCCTCCTGACCTTACCGTCAAAGTCTTTTCAATGCTTGATACCCAGAGTCTATGCTATGCAGCAGCTACTTGCTCAATGTTTAACAAATGTGCTAAGGATCCTTCGTGTTATGCAAACCTTGATTTGACAACACTTGTTCCAAAGGTTAACAATGCAGTAGTTTCCACAATGATTCAGCGAGCTGGAAAGTCCCTAAGGGCTCTGAAGCTTGGTGTGGTCCCTGGTGCTATTGCGTCACCTGGATCTTATCAGCCATTGGTTTATACCATCAGAAATGCCACTGTAGATGTATCTAACTTTTCATGGAATGACAAGAGATCTCGACAAGGGAGAGAGTCATCCATTCTTACTAGATCCTGTTTAAGCCCTTTAAATGCGGATGGTGGTGCTCCAGGGGCTCTTTTGAGAAAGCTACACTTGTACAATATTGAAAGAATGGATAATGCGTCTCTTTGTGGGGCACTATCAGCTTGCCCTTCACTTCTTGATCTAGAAATTGTTGGGCTTCATGTTGAGCTGAGGCAAACGTTAATGACAGTGAGCGAAAACTGCAACTTGATCGAGCGTTTGTTTTTTGAGTCTTCAAAAACAGGTAGAGATGATAGTTTGAAAACACCAACCTGCATTGTTCTTGTAAACAGTTGTCCTCATCTAACTTCTTTGTCCCTGAGAGGGTTTAAGTTACATGATTGTAAAGTTCGCATACTACTTAAGGGATTTCGGAAACTGAAATATGTTGATTTTTCAACATCCTATTCAATCACTGGAAACTTCTTAAGAAACCTTGGAAACAGCAATGGAGCAAATTTTCTTGAGGTTTTAATATTAAGGGATTGCATGCATCTGAAGGAGACGGAAGTTGCTAGATTGATGACAGCAATTCTTGCAGGAGATTTTAAATGTCTTGTACATCTTGACATATCCAATAGGGAAGGTTTAGCATCTGAGGGTGACTGGTATCACAGATGCTACAACTCTAGTATCATACCTATAAAGCAAGTTCTGGAAGCAAGGCCTGATATGTGTTTGCTGGCTGAATATCCATCAGAAGGAAGTTACATTGAGACATTTGATGTTGAGCTGAATAGTGAGATGAGTCTGCCATTGCAATTTAGCAGTCTTACTTCAGATGAAATAAATTGTATGAGTACATCTGAAAGCAGCTACAATAGTGATCAGGGCAGTGGCAATGAGGATGGTCAAGATGCCAGCTTTGTGATTTTTGAGGGAAGTTCAGATGAGATAGAATTTCTGGCCCTTGAGCTTGGGGAGCAGCAGTCAGCAGAGGAAGAAGGATATGGAGTTCTCGACAGTGAATTTTTCTTCAACGTTTTTGGTCATTGTCTTCACTGA 1653 0.4277 MDSPVNSPSSMGKGYCPSQNPRIQNLIQVDHLLESFLGLSEVPSLSVDLSLERLLDSVRTDADQTLLIDRAFNMGSMLLDAAKHSSRKRASKHNSFAWPLPPDLTVKVFSMLDTQSLCYAAATCSMFNKCAKDPSCYANLDLTTLVPKVNNAVVSTMIQRAGKSLRALKLGVVPGAIASPGSYQPLVYTIRNATVDVSNFSWNDKRSRQGRESSILTRSCLSPLNADGGAPGALLRKLHLYNIERMDNASLCGALSACPSLLDLEIVGLHVELRQTLMTVSENCNLIERLFFESSKTGRDDSLKTPTCIVLVNSCPHLTSLSLRGFKLHDCKVRILLKGFRKLKYVDFSTSYSITGNFLRNLGNSNGANFLEVLILRDCMHLKETEVARLMTAILAGDFKCLVHLDISNREGLASEGDWYHRCYNSSIIPIKQVLEARPDMCLLAEYPSEGSYIETFDVELNSEMSLPLQFSSLTSDEINCMSTSESSYNSDQGSGNEDGQDASFVIFEGSSDEIEFLALELGEQQSAEEEGYGVLDSEFFFNVFGHCLH 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3169 550 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 99 499 - -
Glsi02g3169 550 Pfam F-box-like 100 142 IPR001810 GO:0005515
Glsi02g3169 550 Gene3D Ribonuclease Inhibitor 214 442 IPR032675 -
Glsi02g3169 550 FunFam F-box protein isoform A 93 394 - -
Glsi02g3169 550 SUPERFAMILY RNI-like 233 412 - -
Glsi02g3169 550 Gene3D - 83 160 - -
Glsi02g3169 550 SUPERFAMILY F-box domain 94 144 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3169 Glsi-ChrGlsi02 80056077 80064253 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3169 02 80056077 80064253 Glsi02g3169 02 80056077 80064253 ECH