Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3153 ATGTCTGGCTTGATTGAAGGACTTCCTGATGCTGTTGCAATCAGGTGCCTTGCAAGGGTTCCTTTCTATCTCCACCCAAAGTTAGAGCTTGTCTCTCGCTCTTGGAGAGCAGCCATTCATAGCCCTGAGCTATTTAAAGCTCGAGAGGAGGTTGGTTCATCTGAGGATCTGTTATGTGTCTGTGCTTTTGATCCAGAGAACTTATGGCAGCTGTATGACCCTCTACGTGATCTCTGGATTACACTTCCTGTTCTTCCCTCAAAAATCAGACACCTTTCCCACTTTGGTGCTGTCTCTGCTGCTGGAAAGTTATTTGTGATTGGTGGTGGAAGCGATGCTGTTGATCCATTGACCGGTGACCAAGATGGGAGTTTTGCAACAAATGAAGTCTGGTCATATGACCCTGTAGTCCGGCAGTGGACCCCACGTGCATCAATGCTTGTCCCCCGTGCTATGTTTGCATGTTGTGTTTTGAATGGAAAGATTGTCGTGGCTGGGGGATTCACTAGCTGCAGAAAATCAATATCTCAAGCAGAAATGTATGATCCTGAAAAGGATGTGTGGATTCAAATGCCGGATCTGCATCGCACCCATAATTCAGCCTGTTCAGGAGTAGTTATTGGAGGAAAGGTGCACGTATTGCACAAGGGGTTGTCAACAGTGCAAGTTCTAGACAATGCAGGGCCTGGGTGGACTGTTGAGGAATGTGGGTGGCTCCAAGGTCCAATGGCAGTGGTTCAAGGTGCCTTTTATGTTATGAGCCATGGATTTATTATCAAGCAGGACAAAGAAGTGAGAAAGGTGGTAGTTTTAGCATCTGAGTTTCGAAGGAGAATTGGATTAGCAATGATTGGGCTAGGTGATGATTTATATATAATCGGAGGTTTCATTGGCCCTGACAGGTTTAACTGGGACATTAAGCCATTGGCTGATGTTGAGATTCTCACACTCGGGAGTGAGAGACCAACCTGGCGCCAGGCAGCTCCAATGTCTCGATGTCGTGGTACTATCCTTGGTTGTACGCTGCTGAGAATTTAG 1038 0.4672 MSGLIEGLPDAVAIRCLARVPFYLHPKLELVSRSWRAAIHSPELFKAREEVGSSEDLLCVCAFDPENLWQLYDPLRDLWITLPVLPSKIRHLSHFGAVSAAGKLFVIGGGSDAVDPLTGDQDGSFATNEVWSYDPVVRQWTPRASMLVPRAMFACCVLNGKIVVAGGFTSCRKSISQAEMYDPEKDVWIQMPDLHRTHNSACSGVVIGGKVHVLHKGLSTVQVLDNAGPGWTVEECGWLQGPMAVVQGAFYVMSHGFIIKQDKEVRKVVVLASEFRRRIGLAMIGLGDDLYIIGGFIGPDRFNWDIKPLADVEILTLGSERPTWRQAAPMSRCRGTILGCTLLRI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3153 345 SMART fbox_2 8 48 IPR001810 GO:0005515
Glsi02g3153 345 Pfam Kelch motif 149 194 IPR006652 GO:0005515
Glsi02g3153 345 Pfam Kelch motif 92 146 IPR006652 GO:0005515
Glsi02g3153 345 Pfam Kelch motif 278 331 IPR006652 GO:0005515
Glsi02g3153 345 Gene3D - 62 343 IPR015915 GO:0005515
Glsi02g3153 345 CDD F-box_AtAFR-like 4 48 - -
Glsi02g3153 345 PANTHER OS02G0202900 PROTEIN 3 342 IPR045887 -
Glsi02g3153 345 SMART kelc_smart 103 160 IPR006652 GO:0005515
Glsi02g3153 345 SMART kelc_smart 161 208 IPR006652 GO:0005515
Glsi02g3153 345 SMART kelc_smart 289 344 IPR006652 GO:0005515
Glsi02g3153 345 SUPERFAMILY Kelch motif 61 334 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3153 Glsi-ChrGlsi02 79990438 79991475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3153 8 192 Miscellaneous Gene Families AT4G33900 30.102 3.47e-15 73.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3153 02 79990438 79991475 Glsi02g3153 02 79990438 79991475 ECH